FMO11965.5prime Sequence
353 bp (353 high quality bases) assembled on 2012-06-21
> FMO11965.5prime
CAGTCGACATGTCTCGACACAAGCCCGCGTCGGTGGTGCTAACGCTGCTG
TTGGTGGTGCTGTTGGCGCTGATCCACCACCGCCGCATAGATGCCAGATT
CGTGCCCGGTCCGCCTTCAATACCCAGTATTTGCAAAAAACCACCGCCAC
GTTCGGAGGGCGTTTGTGCCATTGATATCGAGGGATACTATTACGATCCG
ATAACATTTGACTGCAAGATGTACAAGATCGGGGCATGCCACTTGATTCG
TGGCCAGAGTTTCGGCAGTCAACAGGATTGCATTTCCACCTGCATCCATG
GGATACGCCGGAATCATGACTTTTATGTGAACGAGGCAAGCTTTCTAGAC
CAT
FMO11965.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:11:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31777-RA | 383 | CG31777-RA | 17..351 | 1..335 | 1645 | 99.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:11:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 3706583..3706791 | 335..127 | 1045 | 100 | Minus |
| 2L | 23513712 | 2L | 3706920..3707047 | 128..1 | 610 | 98.4 | Minus |
Blast to na_te.dros performed 2014-11-28 03:11:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6847..6893 | 75..29 | 127 | 74.5 | Minus |
FMO11965.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-21 10:23:29 Download gff for
FMO11965.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31777-RA | 14..351 | 1..339 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:42:39 Download gff for
FMO11965.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31777-RA | 17..354 | 1..339 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:50:45 Download gff for
FMO11965.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31777-RA | 17..354 | 1..339 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:50:45 Download gff for
FMO11965.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 3706584..3706791 | 127..334 | 100 | <- | Minus |
| 2L | 3706922..3707047 | 1..126 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:42:39 Download gff for
FMO11965.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 3706584..3706791 | 127..334 | 100 | <- | Minus |
| arm_2L | 3706922..3707047 | 1..126 | 98 | | Minus |
