FMO11967.5prime Sequence
725 bp (725 high quality bases) assembled on 2012-06-21
> FMO11967.5prime
CAGTCGACATGCAGTTTACATTTGAGTGCAAAAGAAAGCGCTGCTTTAAT
AAGAATGCGAATTTCACGCCTCTTCCAAGTGGACAGGATGGCGAACGTTA
CAAGGGAAGATTTACAGGACTATCCGTCGAGATAGTTGATCCCGAACAGG
CTAAATCCCTGCACGATAATGGTTGTTTTGGCAAGGGAAGCAAATCTCGC
GGAGGGCCAGCAAGTGGAGACGAGAACGAAACCCTGTTTCTCGGAATGGA
AGAGTCTTGCTTCCTGGCCCACTATTTAAATGTTTTAGATATAACCAACT
CAGCTGGTTATTTAATGGACTTCTGCATGTTTGTGGAGGTCGCCAAAGAG
CACAATGAGAAATTTGTTGAGAACTTGGCCAGCTATGTGTATTTGAAGTC
CAAGAATTGGGTCATCAAGAGCGGTATTAAGTTCGGCGGTGATTTTCTTA
TCTACAAGCAAAGTCCTCGATTGTACCATGCCAGCTTTTTGGTCATTGTG
CAAAAGCCTGGTGATACGGATCACTATCAATCAAAGAACTTGAAGGGTGT
TCAACGCGTGGCAGAAACTTCTGATAAGGATGTGCTGCTCCTGACTGTCC
AACCGCCTAAGAAGATAAGCTCTTCCAGGGATTTGCAGGAAGCCACAGTA
ACAGAGACTATTGTGCGGCGTTTTAATTACTTAACTTTTGTACAAAGCAA
ACAACAAGCAAGCTTTCTAGACCAT
FMO11967.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:11:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31812-RB | 1369 | CG31812-RB | 2..700 | 9..707 | 3480 | 99.9 | Plus |
| CG17996-RA | 529 | CG17996-RA | 457..529 | 707..635 | 365 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:11:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 16729778..16730216 | 9..447 | 2180 | 99.8 | Plus |
| 2L | 23513712 | 2L | 16730271..16730530 | 448..707 | 1300 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 03:11:51 has no hits.
FMO11967.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-21 10:23:31 Download gff for
FMO11967.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31812-RB | 1..703 | 9..712 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:42:43 Download gff for
FMO11967.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31812-RB | 2..704 | 9..712 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:50:49 Download gff for
FMO11967.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31812-RB | 2..704 | 9..712 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:50:49 Download gff for
FMO11967.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 16729776..16730216 | 6..447 | 99 | -> | Plus |
| 2L | 16730271..16730534 | 448..712 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:42:43 Download gff for
FMO11967.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 16729776..16730216 | 6..447 | 99 | -> | Plus |
| arm_2L | 16730271..16730534 | 448..712 | 99 | | Plus |
