FMO11970.5prime Sequence
545 bp (545 high quality bases) assembled on 2012-06-21
> FMO11970.5prime
CAGTCGACATGCTTCACAAGCTGACTTGGGTTCTAATATTTATACCTGCT
TTTCGAGCTGCCGATCCCATTTGCTCTCAAAGGCCGGATGTAACTGCCTT
GAGAAACTGTTGCAAGCTGCCTAATCTGGACTTTTCGAGTTTCAACTCCA
AGTGCAGTCAGTATTTGGTCAATGGAGTCCACATATCACCTTGCAGCTTT
GAGTGCATCTTTCGAGCGGCGAATGCATTAAATGGCACCCATTTGGTTAT
GGAAAATATCGAAAAGATGATGAAAACCATTTTGGGCTCTGATGAATTTG
TGCACGTGTATCTGGATGGATTCAGGAGCTGCGGTAATCAGGAGAAGGTG
CTCATTAAGGCAATGAAACGTCGCCGTGTTCCCATCACCGGAAAATGTGG
CTCGATGGCGATAATGTATGGCCTGTGTGCCCATCGATATGTCTACCGTA
ATTGCCCGGAAAGCGTGTGGAGCAAGAGTGCCACCTGCAATGAGGCCAGG
GAATACAGCATTCGCTGCGATGACATGGCAAGCTTTCTAGACCAT
FMO11970.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:11:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Obp50d-RA | 587 | CG30074-RA | 12..535 | 4..527 | 2605 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:11:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 14373421..14373756 | 192..527 | 1680 | 100 | Plus |
| 2R | 25286936 | 2R | 14373266..14373361 | 96..191 | 480 | 100 | Plus |
| 2R | 25286936 | 2R | 14373119..14373211 | 4..96 | 450 | 98.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 03:11:27 has no hits.
FMO11970.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-21 10:23:26 Download gff for
FMO11970.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Obp50d-RA | 1..522 | 9..531 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:42:28 Download gff for
FMO11970.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Obp50d-RA | 9..538 | 1..531 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:50:35 Download gff for
FMO11970.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Obp50d-RA | 9..538 | 1..531 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:50:35 Download gff for
FMO11970.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 14373116..14373210 | 1..95 | 96 | -> | Plus |
| 2R | 14373266..14373361 | 96..191 | 100 | -> | Plus |
| 2R | 14373421..14373759 | 192..531 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:42:28 Download gff for
FMO11970.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 10260621..10260715 | 1..95 | 96 | -> | Plus |
| arm_2R | 10260771..10260866 | 96..191 | 100 | -> | Plus |
| arm_2R | 10260926..10261264 | 192..531 | 99 | | Plus |
