FMO11971.5prime Sequence
361 bp (269 high quality bases) assembled on 2012-06-21
> FMO11971.5prime
CAGTCGACATGCTTTTAGGATTCAGCCTTGAGATCGTGCCGCAGATCACT
CATCTAGAAAAACTAGAGCTGAATGTCCGAATGCATTCCAGTATCCTGGT
CGAGCTGTGTAAACTGAATCCAAACCTACGAAGACTCATTCTAAGGAATT
CCGAAATATTTGGCAGATTATCGGATATAGTACCTCATTGCAATCAACTG
GAAATATCTGAGCTTTTGTGATGAAAAGAGGTAGATGCATCCGAGTACGT
AGCCCCTGGCCCAATTTGCCGCAACCTTAAGTCCATTTAATTCTGGGGTG
GCCGAGCATCCTCAGGGGAACCGCTTGGGGAAGCTTTTTTAATTCGCTTT
CCAAGAACCCC
FMO11971.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:11:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32107-RE | 3956 | CG32107-RE | 508..832 | 18..358 | 1230 | 93.8 | Plus |
CG32107-RD | 3892 | CG32107-RD | 508..832 | 18..358 | 1230 | 93.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:11:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 12860478..12860739 | 275..9 | 1090 | 97.4 | Minus |
Blast to na_te.dros performed on 2014-11-28 03:11:30 has no hits.
FMO11971.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-21 10:23:27 Download gff for
FMO11971.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32107-RA | 1..299 | 9..317 | 95 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:42:31 Download gff for
FMO11971.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32107-RC | 511..800 | 18..317 | 95 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:50:37 Download gff for
FMO11971.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32107-RD | 508..797 | 18..317 | 95 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:50:37 Download gff for
FMO11971.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 12860441..12860743 | 1..317 | 94 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:42:31 Download gff for
FMO11971.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 12853541..12853843 | 1..317 | 94 | | Minus |