Clone FMO11973 Report

Search the DGRC for FMO11973

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:119
Well:73
Vector:pMK33-CFH-BD
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO11973.5prime Sequence

368 bp (368 high quality bases) assembled on 2012-06-21

> FMO11973.5prime
CAGTCGACATGATCCCAATAAGCTCATCAAAATTAAATAGGAAACTGGCA
AGTAAACCCTTCCTAAATGAAGGACTACCTGCCAGAAAGTCTATCGGTTG
TCTTTTTCTTGGCATAATACTTGGAGTTTTTTTAGCCGGAATACTCTTTT
ACTCGCTGATGAACGAAGACTGCCGGAAAAGTTCGAGGAATATAATGAGC
ATTATTGGAGTGGAAATACCTCAAAACAAAAACGCCACATCGAAATTGGA
TACTGCCGCAAAAAATGTAGAAGAGAGTAGCGTAGCGGTTACACAAGAAA
CCCCTGCTGAATTTAATAAAGCTGATAATAATTCAACAGTTTCAATGCCC
GCAAGCTTTCTAGACCAT

FMO11973.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:12:02
Subject Length Description Subject Range Query Range Score Percent Strand
CG43084-RA 450 CG43084-RA 40..381 9..350 1710 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:12:00
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 15651043..15651323 70..350 1405 100 Plus
3L 28110227 3L 15650891..15650955 9..73 325 100 Plus
Blast to na_te.dros performed on 2014-11-28 03:12:01 has no hits.

FMO11973.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-21 10:23:33 Download gff for FMO11973.5prime
Subject Subject Range Query Range Percent Splice Strand
CG43084-RA 1..345 9..354 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:42:50 Download gff for FMO11973.5prime
Subject Subject Range Query Range Percent Splice Strand
CG43084-RA 40..391 9..362 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:50:54 Download gff for FMO11973.5prime
Subject Subject Range Query Range Percent Splice Strand
CG43084-RA 40..391 9..362 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:50:54 Download gff for FMO11973.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 15650891..15650954 9..72 100 -> Plus
3L 15651046..15651333 73..362 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:42:50 Download gff for FMO11973.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 15643991..15644054 9..72 100 -> Plus
arm_3L 15644146..15644433 73..362 98   Plus