FMO11976.5prime Sequence
500 bp (264 high quality bases) assembled on 2012-06-21
> FMO11976.5prime
CAGTCGACATGCAGTCATTTCTCATCCAAATGCTGCCGATATTGCTTGGA
ATTTTTTTTGTGTGGCTATCGAACAGCACAGCCTTATCTGAGGTGAACTG
GAAGAATCACTCGCTTCACCGCATTCATCATCGCACAAAAGTAATAACTG
CGGTGGACATCATAAGCAGTCACAACTATCCGGTGCAAACACACACTGTG
GTCACCAGGGATGGCTACATACTGTCGGTCTTCCGAATCCCATCATCACA
GCTATGTGCAAGTAGCGAACCAAAAGCCAGTTGTTTTTGATTAACCATGG
CATGACTGGCTCCGCGGAACTCATGGGCTTCTTAACTTGGACCCGCGGAA
ATGGAACTGGCCTTTTTTTGTTGGGCCGAATGCTTGGTTACAATGTGTGG
GCTGAATAAACCGGTCCCCGGGAACCCGGGAACTCCCAGGAAAACCATCC
CCAAACTTCAAGGCCTGGGCTCCTTGGAATTTTTGGCGTTTTTACTTGGG
FMO11976.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:12:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11608-RB | 1379 | CG11608-RB | 1..456 | 9..492 | 1605 | 92.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:12:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 12638735..12638899 | 152..318 | 735 | 98.8 | Plus |
3R | 32079331 | 3R | 12638481..12638566 | 9..94 | 430 | 100 | Plus |
3R | 32079331 | 3R | 12638618..12638681 | 91..154 | 320 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 03:12:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Bari1 | 1728 | Bari1 DMBARI1 1728bp AKA(S55767) Derived from X67681 (g7640) (Rel. 36, Last updated, Version 6). | 758..815 | 374..318 | 125 | 70.7 | Minus |
F-element | 4708 | F-element F 4708bp | 1396..1442 | 123..168 | 106 | 72.3 | Plus |
FMO11976.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-21 10:23:33 Download gff for
FMO11976.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11608-RB | 1..355 | 9..374 | 96 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:42:53 Download gff for
FMO11976.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11608-RB | 1..355 | 9..374 | 96 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:50:56 Download gff for
FMO11976.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11608-RB | 1..355 | 9..374 | 96 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:50:56 Download gff for
FMO11976.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 12638481..12638564 | 9..92 | 100 | -> | Plus |
3R | 12638620..12638679 | 93..152 | 100 | -> | Plus |
3R | 12638736..12638963 | 153..394 | 93 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:42:53 Download gff for
FMO11976.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 8464203..8464286 | 9..92 | 100 | -> | Plus |
arm_3R | 8464342..8464401 | 93..152 | 100 | -> | Plus |
arm_3R | 8464458..8464685 | 153..394 | 93 | -> | Plus |