FMO11977.5prime Sequence
847 bp (847 high quality bases) assembled on 2012-06-21
> FMO11977.5prime
CAGTCGACATGAAGAGCCAACCCATCCTGATTCTGGCCGTGTGCCTCTTG
GCCCTCTCCGCCGTTTCCGCCATGCCACAGCGTCGGGCGAAGAGTCAACG
CCAGGTGGAGTACTCATCCACACCCTATCCGGCTGCTGGCTTCCGCCCCA
GGGTTCCCTTTAATCTGCCCGGTGAAGTTCAACCCAAGATCGAGACGGAA
CCACTGACCACCACCAGTACCACGTCTGCCAGCGAAGTGGAAACCCTGGA
GAATACCGAGCCACTTAGCACCACCGAGCAGCAGCAGCCGGAAGCGGGAA
CGGTAGCGGATTTGGAATTGTCCATCCGCACGCCTGCCAATACCTACGGA
GCCCCTGAAGAGCAGGATCCCCTCGTGCCGGACACCGTAGTGGTGGTGGC
CCAGGAGCCAGCCCGCGACTTTCAGCCCCCCTCCCTGGATGCCGTCGAGG
ACTTTGCCGCCGATGTCACTGTTGCTGCTGATGGCGAGCAGCCTGTTGCT
GATGTCCCTGCCCTGGGCCAAGCGGAGTCGGAGGACGATGAGCCCGAGGC
GGCGGTCAAGGCTGTCACCCCGGCTGGAGCCTATGGACCACCCGCCGCCA
CCTACGGTGTGCCTGAGCTGAGCGAGACCGAGAACGAGTTGGATCTGGAG
GAGTCGCAAGTTGAGCTGGTTGAAGAGGAGGCGGCGGCGGAGGAGGCGCT
GACCAACGAGCTCTCTAGTGGTCGCCTGATCCTCCTGCCCTTGGGCGCCA
GGGGAACACAGTTTGGTCGCCTCATCCTTGCCGTGGAGCAACCACGCCAG
CGCCTGAGGAGCGAACGACTCAGCGGATTGCAAGCTTTCTAGACCAT
FMO11977.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:12:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14564-RA | 890 | CG14564-RA | 1..822 | 9..829 | 4085 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:12:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 21757155..21757971 | 7..823 | 4085 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 03:12:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6781..6837 | 511..455 | 114 | 66.7 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6724..6783 | 511..455 | 112 | 70 | Minus |
FMO11977.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-21 10:23:34 Download gff for
FMO11977.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14564-RA | 1..825 | 9..830 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:42:55 Download gff for
FMO11977.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14564-RA | 1..831 | 9..838 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:50:58 Download gff for
FMO11977.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14564-RA | 1..831 | 9..838 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:50:58 Download gff for
FMO11977.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 21757149..21757982 | 1..834 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:42:55 Download gff for
FMO11977.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 21750249..21751082 | 1..834 | 99 | -> | Plus |
