FMO11979.5prime Sequence
544 bp (544 high quality bases) assembled on 2012-06-21
> FMO11979.5prime
CAGTCGACATGGTTGGACTCAAGTTTCCGTCGAACCGAACACTGGGCAAT
ATTTGTGTCTACGGTGCGGTGGCCTCCATATCCGCTGTGATGTACATGAA
ATGGAAGATGGAGGATCGGGTGAAATCCGCAGAGTACTACAAACTGGCCT
TGAAGGCACTGCGGAGCCATCGAGGAGCAGTTGGTCTCCTGGGTGAACCC
ATCAAGGACTCTGGCATCGATCTGTCCAACGCCAACAACAATTGCAATGC
GGAGGAGGCGCGTTGTGAGGTGGCTGTGCGGGGCAGCAAGGATAAAGGAA
CTTTATACTTTTGGGCGTCCAATCAGCCGGATAGAGGCTGGCTGATCGAT
CGACTGGAGCTGGAAACAAAACTCAACCCAGAGAAAACGATTTTTGCTTA
AAAAATCCGAGGAACTAACCTTCGATCTGCCCGAGAGTATAACCAAAACA
AACTGCCCAGCAAGTTGATTCCCAATGTCATTCTATCCCGCATCGGATCA
ACAACCCAGAAACACCTTTCAAAGGGAAGCTTTCTAAAACCATT
FMO11979.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:12:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15653-RA | 711 | CG15653-RA | 80..594 | 9..529 | 2425 | 98.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:12:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 21060179..21060468 | 298..9 | 1450 | 100 | Minus |
2R | 25286936 | 2R | 21059918..21060124 | 506..296 | 855 | 98.1 | Minus |
Blast to na_te.dros performed on 2014-11-28 03:12:15 has no hits.
FMO11979.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-21 10:23:36 Download gff for
FMO11979.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15653-RA | 35..556 | 1..529 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:43:00 Download gff for
FMO11979.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15653-RA | 73..594 | 1..529 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:51:01 Download gff for
FMO11979.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15653-RA | 73..594 | 1..529 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:51:01 Download gff for
FMO11979.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 21059897..21060122 | 298..529 | 96 | <- | Minus |
2R | 21060180..21060474 | 1..297 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:43:00 Download gff for
FMO11979.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 16947402..16947627 | 298..529 | 96 | <- | Minus |
arm_2R | 16947685..16947979 | 1..297 | 98 | | Minus |