FMO11981.5prime Sequence
452 bp (452 high quality bases) assembled on 2012-06-21
> FMO11981.5prime
CAGTCGACATGGCAAAGTTTTTGGGCATCAACCGGCTGACAAAGCTGTTC
CAGATGGTCCGCGAAGCCGGAGGACTGAAGCAAGCGTACCTGAAGCTCTA
TAGGAACGATGATCTGAAGATCGGAACCCTGGTGGGCATCGACAAGTACG
GCAACAAGTACTTCGAGAACCCGTACTACTTCTACGGCCGCAATCGCTGG
ATCGAGTTCGCCCCCCACGTCAACATGGACTACGATGGATCCATGATTCC
CGCCGAGTGGTACGGCTGGATGCACTACAAGACCGATCTGCCTCCCATTC
GCGATGGATGCCGCCCCAAGTACAAGTGGATAGCGGACCACAGCGAGAAT
CTTTCCGGAACTAAGGAGGCCTACTACCCCTACTCCACAACACCCAACAA
AGTGGAGGCCTGGGAACCCAAGGCGAAGAAGCAGGCAAGCTTTCTAGACC
AT
FMO11981.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:12:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3214-RB | 618 | CG3214-RB | 33..460 | 7..434 | 2140 | 100 | Plus |
| CG3214-RA | 621 | CG3214-RA | 93..519 | 8..434 | 2135 | 100 | Plus |
| CG3214-RC | 677 | CG3214-RC | 149..575 | 8..434 | 2135 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:12:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 2579619..2579798 | 281..102 | 900 | 100 | Minus |
| 2L | 23513712 | 2L | 2579859..2579955 | 104..8 | 485 | 100 | Minus |
| 2L | 23513712 | 2L | 2579483..2579569 | 366..280 | 435 | 100 | Minus |
| 2L | 23513712 | 2L | 2579359..2579427 | 434..366 | 345 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 03:12:22 has no hits.
FMO11981.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-21 10:23:37 Download gff for
FMO11981.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3214-RB | 36..469 | 1..434 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:43:05 Download gff for
FMO11981.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3214-RB | 27..460 | 1..434 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:51:04 Download gff for
FMO11981.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3214-RB | 27..460 | 1..434 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:51:04 Download gff for
FMO11981.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 2579360..2579426 | 367..433 | 100 | <- | Minus |
| 2L | 2579483..2579567 | 282..366 | 100 | <- | Minus |
| 2L | 2579619..2579796 | 104..281 | 100 | <- | Minus |
| 2L | 2579860..2579958 | 1..103 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:43:05 Download gff for
FMO11981.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 2579860..2579958 | 1..103 | 96 | | Minus |
| arm_2L | 2579360..2579426 | 367..433 | 100 | <- | Minus |
| arm_2L | 2579483..2579567 | 282..366 | 100 | <- | Minus |
| arm_2L | 2579619..2579796 | 104..281 | 100 | <- | Minus |
