Clone FMO11988 Report

Search the DGRC for FMO11988

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:119
Well:88
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG15362-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO11988.5prime Sequence

377 bp (287 high quality bases) assembled on 2012-06-21

> FMO11988.5prime
CAGTCGACATGTACATAGCCGGGCTGGCCGGTTTGGGCTTAATAGTTTTG
GTATCGATCTACAAATGTGCCAGTGGCGAGGTTCGCCAGGCGGAAAGCGA
AAAGTGCTTCTTCTGCGACTTCGCCCACCGCCGCCAAGGACCGCCGCCCA
TCCTGGAGGTGGAGACGGACGAGTACGTGATCTTCAAGGACAAGTATCCG
GCAGCCAGACTCCACTATCTGGCGATTCCCAAGGAGCACTTCGACAGCCT
GAAAGCGCTGAACAAATCGCACGTTGGATTGGTGCGGCGAATGGAGCAGG
GCATGATGGAATTCCCTGCGATCGCAAACGTGGATCCCAAGGAGGCGATG
TGGGCTCCACTTGCGCCGTCATCTCGG

FMO11988.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:12:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG15362-RA 813 CG15362-RA 135..507 9..377 1720 98.4 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:12:35
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 1981310..1981583 9..282 1370 100 Plus
2L 23513712 2L 1981641..1981708 282..349 245 97.1 Plus
Blast to na_te.dros performed on 2014-11-28 03:12:36 has no hits.

FMO11988.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-21 10:23:40 Download gff for FMO11988.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15362-RA 1..373 9..377 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:43:13 Download gff for FMO11988.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15362-RA 135..507 9..377 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:51:11 Download gff for FMO11988.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15362-RA 135..507 9..377 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:51:11 Download gff for FMO11988.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 1981310..1981583 9..282 100 -> Plus
2L 1981642..1981740 283..377 94   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:43:13 Download gff for FMO11988.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 1981310..1981583 9..282 100 -> Plus
arm_2L 1981642..1981740 283..377 94   Plus