FMO11989.5prime Sequence
443 bp (443 high quality bases) assembled on 2012-06-21
> FMO11989.5prime
CAGTCGACATGGGTGGCAAAAGTTATTATTGCGACTACTGCTGTTGCTTT
CTGAAAAACGATCTGAATGTGAGGAAATTGCACAATGGTGGTATTGCACA
CGCAATTGCAAAGAGCAACTATTTGAAGCGTTACGAGGATCCCAAAAAGA
TTTTGACTGAAGAGCGGCAGAAAACTCCTTGCAAGCGATACTTTGGCAGT
TACTGCAAGTTTGAAACATATTGCAAGTTTACCCACTATAGTGGCGATAA
TCTACGGGAACTGGAGAAGTTGGTTCTCGCTAGAAAGAAGAGAAAATCCC
GAAAGAAAACCAACAAATGCAAGAGATGGCCCTGGAAAACTCATCTGCGA
AAGGGATTACCCCCTTCCTTGCAACCCATTAACCCGGAAAAACTCAAGCA
AACCGACTTTGAACTCAGTTGGGGCGCAAGCTTTCTAGACCAT
FMO11989.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:12:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31922-RA | 497 | CG31922-RA | 54..470 | 9..425 | 2085 | 100 | Plus |
Plap-RC | 2746 | CG5105-RC | 3..132 | 138..9 | 650 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:12:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 1170610..1170762 | 273..425 | 765 | 100 | Plus |
2L | 23513712 | 2L | 1170418..1170553 | 138..273 | 680 | 100 | Plus |
2L | 23513712 | 2L | 1170234..1170363 | 9..138 | 650 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 03:12:39 has no hits.
FMO11989.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-21 10:23:40 Download gff for
FMO11989.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31922-RA | 47..473 | 1..429 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:43:15 Download gff for
FMO11989.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31922-RA | 47..473 | 1..429 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:51:13 Download gff for
FMO11989.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31922-RA | 47..473 | 1..429 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:51:13 Download gff for
FMO11989.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 1170227..1170363 | 1..138 | 97 | -> | Plus |
2L | 1170419..1170553 | 139..273 | 100 | -> | Plus |
2L | 1170611..1170765 | 274..429 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:43:15 Download gff for
FMO11989.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 1170227..1170363 | 1..138 | 97 | -> | Plus |
arm_2L | 1170419..1170553 | 139..273 | 100 | -> | Plus |
arm_2L | 1170611..1170765 | 274..429 | 98 | | Plus |