Clone FMO11989 Report

Search the DGRC for FMO11989

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:119
Well:89
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG31922-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO11989.5prime Sequence

443 bp (443 high quality bases) assembled on 2012-06-21

> FMO11989.5prime
CAGTCGACATGGGTGGCAAAAGTTATTATTGCGACTACTGCTGTTGCTTT
CTGAAAAACGATCTGAATGTGAGGAAATTGCACAATGGTGGTATTGCACA
CGCAATTGCAAAGAGCAACTATTTGAAGCGTTACGAGGATCCCAAAAAGA
TTTTGACTGAAGAGCGGCAGAAAACTCCTTGCAAGCGATACTTTGGCAGT
TACTGCAAGTTTGAAACATATTGCAAGTTTACCCACTATAGTGGCGATAA
TCTACGGGAACTGGAGAAGTTGGTTCTCGCTAGAAAGAAGAGAAAATCCC
GAAAGAAAACCAACAAATGCAAGAGATGGCCCTGGAAAACTCATCTGCGA
AAGGGATTACCCCCTTCCTTGCAACCCATTAACCCGGAAAAACTCAAGCA
AACCGACTTTGAACTCAGTTGGGGCGCAAGCTTTCTAGACCAT

FMO11989.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:12:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG31922-RA 497 CG31922-RA 54..470 9..425 2085 100 Plus
Plap-RC 2746 CG5105-RC 3..132 138..9 650 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:12:38
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 1170610..1170762 273..425 765 100 Plus
2L 23513712 2L 1170418..1170553 138..273 680 100 Plus
2L 23513712 2L 1170234..1170363 9..138 650 100 Plus
Blast to na_te.dros performed on 2014-11-28 03:12:39 has no hits.

FMO11989.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-21 10:23:40 Download gff for FMO11989.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31922-RA 47..473 1..429 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:43:15 Download gff for FMO11989.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31922-RA 47..473 1..429 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:51:13 Download gff for FMO11989.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31922-RA 47..473 1..429 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:51:13 Download gff for FMO11989.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 1170227..1170363 1..138 97 -> Plus
2L 1170419..1170553 139..273 100 -> Plus
2L 1170611..1170765 274..429 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:43:15 Download gff for FMO11989.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 1170227..1170363 1..138 97 -> Plus
arm_2L 1170419..1170553 139..273 100 -> Plus
arm_2L 1170611..1170765 274..429 98   Plus