Clone FMO11990 Report

Search the DGRC for FMO11990

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:119
Well:90
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG32551-RB
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO11990.5prime Sequence

338 bp (338 high quality bases) assembled on 2012-06-21

> FMO11990.5prime
CAGTCGACATGATTTCCGGACCCAGATTCTCTGCCCTACTAATCGTGGCC
CTGACCCTCGCTCTGGTGGCCCAAACTTGGGCCGACGAGTTCGATCTGGA
CTACTCCAACGAGTACGACGATGTGCGACCGCATTTGGTCTATCCCGACG
ATCCAAGGCTGGACAAGCGGATCGGCGATGCGGCGCGGGAGTTTGGACAA
AATATAACCCAAGCCTGGAACGCGATGGTGGACTCGTTTAAGAACTACTT
TGAGGAACTCAAGAACCTTTTCTCCGACACCACGGATCTCGATTCACCCA
ATGAAGTATTTTCTAACCGCGCAAGCTTTCTAGACCAT

FMO11990.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:12:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG32551-RB 393 CG32551-RB 29..340 9..320 1560 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:12:42
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 18438896..18439207 9..320 1560 100 Plus
Blast to na_te.dros performed on 2014-11-28 03:12:43 has no hits.

FMO11990.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-21 10:23:41 Download gff for FMO11990.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32551-RB 29..344 9..324 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:43:17 Download gff for FMO11990.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32551-RB 29..344 9..324 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:51:15 Download gff for FMO11990.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32551-RB 29..344 9..324 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:51:15 Download gff for FMO11990.5prime
Subject Subject Range Query Range Percent Splice Strand
X 18438896..18439211 9..324 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:43:17 Download gff for FMO11990.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 18332929..18333244 9..324 99   Plus