FMO11993.5prime Sequence
569 bp (569 high quality bases) assembled on 2012-06-21
> FMO11993.5prime
CAGTCGACATGGACAGCGGCGAGGTGAAAATATCTTTGGAGGATTCCCCC
AGCTCCGGGGAAAGTTTCGCCAGTACAACCAGTGGACCATGTTGCGGTTC
TGGCAGGGATTTGGATATTCAGGTGCATGAAAGCCATATAAAAGACGACC
AGTTCCCATCCAGGGCCACCAGTGAATTACAAGAATCCAAAAAATCGAAC
AAGAAATGTTCCAGCGATCTTTCGACAGAGAATAGCTATGCTGCCAACAA
AAATGTAGCTGAAGGCCTAATGGATATAGCTTTGCTTTCGGCGAATGCGA
ATCAGTTGCGATTCCTGATCACCTATAACGACAAGGCTTCCACGTACATA
TACAGCATGATTATGGTGATACTTTCCCTGGTGCTGCAGCTTTTAGTTGG
CATAATGCTGATCTTTAAACGACGTCTCAAGCGATTTAGGAACCGAAGTT
ACGAAAGAACCAACGATCTGCTCGTAATGGGAGTTTTCATGATCACAGTG
ATCAACATTCTGCTGGCCGCATTTACCACAACGGATGGAGGAGGCAGTCA
TGCAAGCTTTCTAGACCAT
FMO11993.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:12:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| NijB-RA | 741 | CG11637-RA | 1..543 | 9..551 | 2715 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:12:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 18892383..18892639 | 9..265 | 1285 | 100 | Plus |
| 3L | 28110227 | 3L | 18892739..18892895 | 263..419 | 785 | 100 | Plus |
| 3L | 28110227 | 3L | 18892949..18893080 | 420..551 | 660 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 03:12:53 has no hits.
FMO11993.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-21 10:23:43 Download gff for
FMO11993.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11637-RA | 1..543 | 9..551 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:43:24 Download gff for
FMO11993.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| NijB-RA | 1..543 | 9..551 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:51:20 Download gff for
FMO11993.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| NijB-RA | 1..543 | 9..551 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:51:20 Download gff for
FMO11993.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 18892373..18892638 | 1..264 | 98 | -> | Plus |
| 3L | 18892741..18892895 | 265..419 | 100 | -> | Plus |
| 3L | 18892949..18893080 | 420..551 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:43:24 Download gff for
FMO11993.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 18885473..18885738 | 1..264 | 98 | -> | Plus |
| arm_3L | 18885841..18885995 | 265..419 | 100 | -> | Plus |
| arm_3L | 18886049..18886180 | 420..551 | 100 | | Plus |
