Clone FMO11994 Report

Search the DGRC for FMO11994

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:119
Well:94
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG13086-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO11994.5prime Sequence

572 bp (572 high quality bases) assembled on 2012-06-21

> FMO11994.5prime
CAGTCGACATGCCGAATCGCGCGACGCGGAAGAAATATCGCCGGATTCGA
CTCCACATTTTCCTGGCATTATCCCTATGGTTCCTGATCGAGGCTCATCC
CGTCGAAGGAACACGGTGCAGGAATCCCTATGAGAGGGTACGGGAAAACT
ATTGCTACTTCGTTGCTGACGAGGAACCGCTGCACACATCGTTCCATAAC
TTTTGCTATCAGGACAAGCGCACCTCACGAGTTTGCCTGGATAGTGACGA
GGAAATGCGCGTTCTGGCCCATCACCTGGCCAACTTGGGCTACCCGAACG
GCACGCAGTTCTGGAGCGCCGGGCATCGATGGCCGGGTGATAACCGCTTC
TACTGGAACTACTTTGGCAGAGCCCGACCGCTCAACTACTCCAACTGGGC
GGTGGACGAGCCGACGCCCCAAATGGGCCGCAATTGCCTGATCCTCACTC
TCCAGGGTGGAGAACTCATCATGAGCAGTGAGTCCTGCTACACCCGAGCG
GTCGATATCTGCGAACAGACGCTGAACGGCACGGATTCCCGTCCCGTAAT
CCACGCAAGCTTTCTAGACCAT

FMO11994.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:12:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG13086-RB 690 CG13086-RB 20..565 9..554 2730 100 Plus
CG13086-RA 617 CG13086-RA 20..565 9..554 2730 100 Plus
CG13086-RC 572 CG13086-RC 148..520 182..554 1865 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:12:24
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 19364973..19365345 182..554 1865 100 Plus
2L 23513712 2L 19364394..19364567 9..182 870 100 Plus
Blast to na_te.dros performed on 2014-11-28 03:12:25 has no hits.

FMO11994.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-21 10:23:38 Download gff for FMO11994.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13086-RA 1..546 9..554 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:43:07 Download gff for FMO11994.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13086-RA 13..565 1..554 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:51:06 Download gff for FMO11994.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13086-RA 13..565 1..554 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:51:06 Download gff for FMO11994.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 19364387..19364567 1..182 97 -> Plus
2L 19364974..19365345 183..554 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:43:07 Download gff for FMO11994.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 19364387..19364567 1..182 97 -> Plus
arm_2L 19364974..19365345 183..554 100   Plus