FMO11995.5prime Sequence
428 bp (240 high quality bases) assembled on 2012-06-21
> FMO11995.5prime
CAGTCGACATGGGCTCCTCTTTATGTCCCGTCTCTTATCTGGCGGTCTTG
GCAATTATCGTCCTAACCAGTAATATTACAGTCCAGGCTAAAAGGACATT
CAGGATCCTTTAAATTAGAAAAGGTGACTGAGGATACCTCATATCTGCGC
AGTCGTCTGCGTATCGCTGAGTCCGAGGAAAATGAGTTGAAAGTCAGCGG
ATATCTCGATCTGAATCAACGACTCGACAATGATTGGACGGTTGTGCTTA
AGGTTTCAGATCCCCGGATAGCGATGGAGACTACGAGAAGGTTTTGACAT
TCCAAATGCAGCTTTGCGACTTTATGAAGAGCTACTACAAGGATATCTTT
TACGACCGGATCCAGGAATACTCGAATGCCCGCAACCCACCAGCTGTGCC
TCCTGCCCCAAGAACGCTATGTACTAAA
FMO11995.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:12:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CheA87a-RA | 643 | CG14379-RA | 22..438 | 9..426 | 1840 | 96.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:12:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 13369669..13369901 | 9..242 | 1090 | 98.7 | Plus |
| 3R | 32079331 | 3R | 13369955..13370141 | 240..426 | 645 | 93.1 | Plus |
Blast to na_te.dros performed on 2014-11-28 03:12:29 has no hits.
FMO11995.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-21 10:23:38 Download gff for
FMO11995.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CheA87a-RA | 1..416 | 9..425 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:43:08 Download gff for
FMO11995.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CheA87a-RA | 15..437 | 1..425 | 95 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:51:07 Download gff for
FMO11995.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CheA87a-RA | 15..437 | 1..425 | 95 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:51:07 Download gff for
FMO11995.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 13369662..13369899 | 1..240 | 97 | -> | Plus |
| 3R | 13369956..13370140 | 241..425 | 94 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:43:08 Download gff for
FMO11995.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 9195384..9195621 | 1..240 | 97 | -> | Plus |
| arm_3R | 9195678..9195862 | 241..425 | 94 | | Plus |
