FMO12002.5prime Sequence
1134 bp (1018 high quality bases) assembled on 2012-06-25
> FMO12002.5prime
CAGTCGACATGCCATCGAAAAAGAAAAAATACAACGCACGCTTTCCGGCG
GGTCGCATCAAGAAGATCATGCAAAGCGACGAGGAAATCGGGAAGGTGGC
CCAGGCGGTGCCTGTTATCATCTCACGCACGCTGGAGCTCTTCGTGGAGT
CGCTGCTGACCAAGACGCTGCGCATCACGAATGCGCGCAACGCCAAGACG
CTATCGCCATCGCACATGAGGCAGTGTATCGTATCCGAGAAACGCTTTGA
CTTCCTCAAGGAGCTGGTCCGCAACATACCCGACATCAGTGTGGCCGAGG
AGGCCGCCTACAACGAGGACGATGTGTTACGCAGCTCGCCAGAGGAACAG
TATCCAGATTCAGACACGCCATATGATCTTAGCCTGCCATCGACGTCAAT
GCGCTCGCAGGCGAACGGCACAGCTGCCTACATGCGCTCCATGAGTCTGA
ACAACGGAGCCGGATCGGGCGGAGGAGCCGCAGCCACCAAGCGGCAGTTT
CAGTCGCAGCACTCCACCCAGGAAACTCCCACCACCAGCACCACCCTGCC
CGCCAAGCTGGCCCGCTCCGGGTCCATGCCGGCCTACACGCCACGGGGCA
GACCGCCCAATCACCTCAAGAAACAGTCGGTGCAGCTCGATACTGCCATA
CCCGCCCCGATCTGCAACTACGAACTCAACAAGCCCATTGTCAAGATCGA
CTACAGCCACGTGCAAATGCCGACGGCGAACCTGTGCACACCGGACGCCT
CTGATTCTGGGTCAGGATCGGGCGCCGGATCTGGAGCTTTTAACTTCGAC
ATAGCTGCTCCGGTGATCAATATCGATCTGACGAATATCGTGGCCGGTGG
AGCACCTGGCAGTGGTGTGCCCCCGCTCTATTGATTACCAGCGGCCACGC
CGGGGGACAACATAATGTGAACCAATGGCTGGAAGAGCAGCGCTCCCATC
ATTCCAAGGCCACAGCGGCATCAGCGACCCCCACCTGAACCGTTTTTCGA
ATTAGAACGAGACTTTGACAATATGCAAGCTTCCTAGACCATCGTTTGGC
GGTGCGGGCAAGGTAAGTGGTCATATCATATCATATCATATCCTAAGTCA
CACACTTAGCCTAGAGATCTTGCTCATAACATGG
FMO12002.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:13:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
NC2alpha-RA | 1235 | CG10318-RA | 96..1117 | 9..1024 | 4810 | 98.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:12:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 21670495..21671475 | 50..1024 | 4425 | 98.4 | Plus |
2R | 25286936 | 2R | 21670247..21670289 | 9..51 | 215 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 03:13:00 has no hits.
FMO12002.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-25 11:41:08 Download gff for
FMO12002.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
NC2alpha-RA | 80..1101 | 9..1024 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:43:28 Download gff for
FMO12002.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
NC2alpha-RA | 96..1117 | 9..1024 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:51:23 Download gff for
FMO12002.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
NC2alpha-RA | 96..1117 | 9..1024 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:51:23 Download gff for
FMO12002.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 21670247..21670288 | 9..50 | 100 | -> | Plus |
2R | 21670496..21671475 | 51..1024 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:43:28 Download gff for
FMO12002.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 17557752..17557793 | 9..50 | 100 | -> | Plus |
arm_2R | 17558001..17558980 | 51..1024 | 98 | | Plus |