FMO12003.5prime Sequence
1103 bp (974 high quality bases) assembled on 2012-06-25
> FMO12003.5prime
CAGTCGACATGGCATCTTCATCCGCTTGGCTAGTCCTTCTCATGGGCATT
GGCCTTTCTGGCGCCCTGGATTTGAATTTACAAAATAGCAGTAGCAAACT
CTTGACGGTTCTCAACACATCTGCTCCGGTTCAAGAGTTGCTATACCACA
TCGATGTCTGGCGAAATGAGGCAGCTGCTGTGGCCCAGGATAATCCAACT
TCTTCCAACCTGGAATCAGTAATTCGCTCTGAAGTTGGAGGTGACTGGGA
GCGGGGTAGGCTAGTCCTTCAATTAGCGAATCAAGCCAGAACTTTGGAGC
TCAAGCAGGCTATTTACACAGCGTTGTGGAAGGAGCTCCAGCAGACCAAG
CAGATTTACGATCCCCTAAAGATTTTAGAATTTTATGACCAGCTGGCTGT
GCACACTGATGTTCCACTCCAACTTATGGATCATATTTACCGGGCTTTCA
TCAGCCGAAGTGCCCAGTTATTGGAAGCTCCATTTCACACAGCCAGTCGA
TTGGCCACTTTTCCATTGGTAAACTCTCTGGTCAATCGTCTAACATTCAG
CACTTTGGATTATCTGAGAGACATTCTGGAAGTTCTCTACGATGCTGTTT
TGGCCCTAGAAACACCTTTAAGTGTAGTGCAGCGCCTGGGAAATTTAACG
GCTAGTTTGAGGCAATTGGCTCAAGCTAATCTTCAATTACTTAGCAGGGA
GGAACTCAAACGTGGAAATCCCGAAGTGCAAAAGGCCCTGCAGAGCAACA
TCAGAAATTTGCTTTCGCAGCCTGAGTTTGAAAAGAAGTTGCAAAATCCC
TCCAATCGGAAATCTATGCACACCTTCCGAAAGACGAGCAACTGCTGTAC
ACCGCTCGAAAAGTATGCATCCGGGAATGTGACTGAAGAAATTCGTACAT
TTACGAATGCCCGCAGACGTACCTCATCTGCAGTAACGCTTCGAGATCCA
AAGAAGGCTGCGTATTTCATCCACGTGACAACAGTAACGACAGCCGGCCC
GCCAATTTGCTTTTATATGTGCCTTCCGGCGGTATCGCCTACATCCCTCA
TGGAACCAGCCACTGCCTTTGCGAGCATGCAACCATCGTATACCAAAATC
GTT
FMO12003.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:13:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6602-RA | 1401 | CG6602-RA | 6..1100 | 9..1103 | 4975 | 97.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:13:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 6072144..6073209 | 9..1077 | 4720 | 97.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 03:13:04 has no hits.
FMO12003.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-25 11:41:09 Download gff for
FMO12003.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6602-RA | 1..1075 | 9..1085 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:43:31 Download gff for
FMO12003.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6602-RA | 2..1080 | 5..1085 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:51:24 Download gff for
FMO12003.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6602-RA | 2..1080 | 5..1085 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:51:24 Download gff for
FMO12003.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 6072136..6073194 | 1..1062 | 98 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:43:31 Download gff for
FMO12003.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 6065236..6066294 | 1..1062 | 98 | <- | Plus |
