FMO12004.5prime Sequence
494 bp (494 high quality bases) assembled on 2012-06-25
> FMO12004.5prime
CAGTCGACATGGAGGTGGAATTCAGTAGGGAGAACTTCCTGCTGCCGGAG
ATGAAGTACGAGTACCTGGATCACACGGCGGATGTTCAAATCCACGGATG
GGGATCGTCGCTGAAAGAGGCGTTCGAACAGTGCGGAGTGGCCATGTTTG
GATATATGACCGAACTGGATTACGTGTCCGTGGAGCAGTGCTTTGAAATC
GAAGCGCATGGAGATGATCTGGAGAGCTTACTCTTTCACTTTCTGGACGA
GCTGCTGTTCCTGTTCTCTGCCGAACCGTATCTGGTGTGCAAGAAGCTGG
AGATCACCAAGTTCGATGTGGAAAACTTCGAGATTTCCTGCCATTGTTAC
GGGGAACCATTTGAGCTGGGGAAACATCCGCAGGGCACCGAAGTGAAGGC
AATCACATACTCGGCCATGCAAATCATTCAGGACGTGGAGGCCAGCAACT
ACGAGGTGTTCGTGATAATTGACATTGCAAGCTTTCTAGACCAT
FMO12004.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:13:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6353-RA | 1222 | CG6353-RA | 109..576 | 9..476 | 2340 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:13:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 21661832..21662219 | 476..89 | 1940 | 100 | Minus |
3R | 32079331 | 3R | 21662810..21662864 | 63..9 | 275 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 03:13:07 has no hits.
FMO12004.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-25 11:41:10 Download gff for
FMO12004.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6353-RA | 90..562 | 1..476 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:43:32 Download gff for
FMO12004.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6353-RA | 104..576 | 1..476 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:51:25 Download gff for
FMO12004.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6353-RA | 104..576 | 1..476 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:51:25 Download gff for
FMO12004.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 21661832..21662219 | 89..476 | 100 | <- | Minus |
3R | 21662719..21662743 | 64..88 | 100 | <- | Minus |
3R | 21662810..21662869 | 1..63 | 93 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:43:32 Download gff for
FMO12004.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 17487554..17487941 | 89..476 | 100 | <- | Minus |
arm_3R | 17488441..17488465 | 64..88 | 100 | <- | Minus |
arm_3R | 17488532..17488591 | 1..63 | 93 | | Minus |