Clone FMO12006 Report

Search the DGRC for FMO12006

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:120
Well:6
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG12641-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO12006.5prime Sequence

443 bp (443 high quality bases) assembled on 2012-06-25

> FMO12006.5prime
CAGTCGACATGAAGATTCCGCCGGCCAGGTCGCCGTCACAGTTGGCTCCA
CCGGCACAGCTGCGCAAGACGGCCAGTGTGCGCGATGATCCAGCTGGTCT
GGCCAAGCGACGGAGTCGCCTCCAGGAGATCCGGGCTGCCAGCAGTAGTG
CGGGTGGTGGTGGTGGTGGCGGCGAGGCAGCTGCCGCCTTCACCAAGCGG
GAATCCAAGCGGGATCGTCGACGTGGAGGAGGAGGAGGAGCAGGAGCAGC
AGCAGCAGCAGCAGCAGGAAGTGGTAGCAGCGGCAGTGGATCCCAGTCGC
CCACCATGCGCAAATCGCATTCCCTGGACGCCGCCGAGAGCTACACGTTG
GCCAGCATCCAGGCGCCGCTCTGGGTGACCCTCACCAATGCTCGCACCAT
CGACGAGCTGGCCCAGCAAAAGATGGCAAGCTTTCTAGACCAT

FMO12006.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:20:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG43740-RC 1878 CG43740-RC 1205..1621 9..425 2085 100 Plus
CG43740-RB 1850 CG43740-RB 1177..1593 9..425 2085 100 Plus
CG43740-RA 1878 CG43740-RA 1205..1621 9..425 2085 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:20:17
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 10347121..10347537 9..425 2085 100 Plus
Blast to na_te.dros performed on 2014-11-28 03:20:19 has no hits.

FMO12006.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-25 16:45:37 Download gff for FMO12006.5prime
Subject Subject Range Query Range Percent Splice Strand
CG12641-RA 709..1142 2..436 97   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:47:59 Download gff for FMO12006.5prime
Subject Subject Range Query Range Percent Splice Strand
CG43740-RA 1197..1630 2..436 97   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:54:58 Download gff for FMO12006.5prime
Subject Subject Range Query Range Percent Splice Strand
CG43740-RA 1197..1630 2..436 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:54:58 Download gff for FMO12006.5prime
Subject Subject Range Query Range Percent Splice Strand
X 10347113..10347546 2..436 97   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:47:59 Download gff for FMO12006.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 10241146..10241579 2..436 97   Plus