FMO12007.5prime Sequence
1124 bp (1010 high quality bases) assembled on 2012-06-25
> FMO12007.5prime
CAGTCGACATGGAGGAAGAGGCGCCGCGGTTCAATGTGCTGGAGGAGGCG
TTCAACGGCAATGGGAACGGGTGCGCCAACGTGGAGGCCACCCAATCGGC
CATATTAAAAGTGCTGACGCGCGTTAATCGCTTCCAGATGCGCGTCCGCA
AGCACATCGAAGACAACTACACGGAGTTTTTGCCCAACAACACGTCGCCG
GACATATTTCTGGAGGAGTCGGGGTCCTTGAATCGCGAGATTCACGACAT
GCTCGAGAACTTGGGCTCCGAGGGACTGGACGCCTTGGACGAGGCGAATG
TCAAGATGGCGGGTAACGGCAGGCAGCTGCGAGAGATCCTTTTGGGTCTG
GGTGTCAGCGAGCATGTGCTAAGGATCGACGAGCTGTTCCAGTGCGTGGA
GGAGGCCAAGGCCACCAAGGATTACTTGGTGTTACTGGACCTTGTCGGTC
GTTTGAGGGCTTTCATCTATGGCGATGATTCCGTTGACGGGGACGCGCAG
GTGGCCACGCCAGAGGTTCGACGCATCTTTAAGGCTCTCGAGTGCTACGA
GACCATCAAGGTGAAATACCATGTACAGGCATATATGCTGCAGCAGAGCC
TCCAGGAGCGCTTCGATCGCCTGGTGCAGCTGCAGTGTAAATCCTTTCCC
ACATCGCGTTGCGTCACCTTGCAGGTGAGCCGGGATCAAACGCAGCTGCA
GGATATTGTGCAGGCTCTCTTCCAGGAGCCCTACAATCCGGCGCGCCTCT
GCGAATTCCTGCTGGACAATTGCATAGAACCGGTGATCATGCGCCCAGTG
ATGGCCGATTACAGCGAAGAAGCCGATGGTGGCACCTACGTTCGATTGTC
GCTTTCCTACGCCACCAAGGAGCCCAGCTCAGCGCAGCTCGCCGACTACA
GCAGTCTTGAGACTCAGCTGCTGCTGCACACGCTGCGGATCACTGCATGT
GTCAGGGACACCTGTTTGGCATATGCGATCATGTGAGAAAATGCTGATAC
TGTGACATGCTGTCCAGCTGGCCGAAGCCGAGAATCAACTCACCTGGGAG
ATCCCATGAACTGCTGAACCTCTCTCACATCAGCTAGCTGATACTCCACG
TCATGACGGATCCGTGAGTGCACC
FMO12007.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:20:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Zw10-RB | 2567 | CG9900-RB | 104..1106 | 6..986 | 4470 | 97.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:20:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 2604300..2605183 | 6..889 | 4390 | 99.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 03:20:22 has no hits.
FMO12007.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-25 16:45:37 Download gff for
FMO12007.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mit(1)15-RC | 107..1048 | 1..935 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:48:01 Download gff for
FMO12007.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mit(1)15-RB | 101..1042 | 1..935 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:55:01 Download gff for
FMO12007.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Zw10-RB | 101..1042 | 1..935 | 98 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:55:01 Download gff for
FMO12007.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 2604297..2605238 | 1..935 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:48:01 Download gff for
FMO12007.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 2498330..2499271 | 1..935 | 98 | == | Plus |
