FMO12008.5prime Sequence
927 bp (927 high quality bases) assembled on 2012-06-25
> FMO12008.5prime
CAGTCGACATGCACAGGACATATGTAAGCCATGCGATATACGCCATTTGG
CTGGTTATATTCGCCACTGCCGGCATAATGGCCCAGCTAGACCTGGATCA
GATCCAGACCCAGCTGCCCGACCAGCTGAGGAAGTCAAACTTTAGCGTGA
ACGACGCCAAGGAGCTATTTCGCAACAAATGCATCGAGGTGGCCGGCGAG
GAGGCGGGCGTCGAGGCATACGGCGAGATCGAGTCCGGATTCATGGTGCT
AACCGAGTGCCTCAATGGCATTGTCAACTACACGGCAATGCAGCAGGAGA
TACAGGAAGCGTCGCCCAAGGGCGAACTGGATGTGGTCTTCAACAAGTAC
TGCAGCCGGCGTTCGAATGCCGTCGAGTGTGTGGATGCGTTCACGGCCAA
ACTGGTGCCCTGTCTGGTGCAGGAGGAGCGCGAGGGCCAGGATGTCATTA
AGCAGATCATCCAGAGTCTGCTCAACTTTGTGTGCCACAAGGATGGCGAT
CAGATAGCCCTGTTCATTGCCGAAAAGGGACCCGAATGCATTGAGTCCCA
GAAGGACAACATTCAGCAGTGCGTGAACAGCACGTTCTCCGAGTACCTGA
ACGTGTCGGATCTGCAGGACAACCGCATCAGGAGCATGCCCAAGCTGACG
GTCGGTCAGAAACAGTGCGACGAGATGCTGACTCTGCAGGCGTGTGTGGT
CCGTAAACTGGAGCAATGCTCGGACATAACACCGGCGAATCTCGTCGAGT
CCATGTTCAACTTCATTCGGAACCAAACGATGTGCCGTGACAATCAGAAA
TCGCCGCTCGTTGCGGCTGCCGCCAGCGGAGGGAGTCTGGTATTCCATCA
AGTGTGGACCCATGTGGGCATCTTTTTGCTAATCCTGCGATTCGCTCTAC
AAAGTCTTCTGCAAGCTTTCTAGACCA
FMO12008.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:13:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9917-RB | 1726 | CG9917-RB | 203..1106 | 8..910 | 4480 | 99.8 | Plus |
CG9917-RA | 1801 | CG9917-RA | 278..1181 | 8..910 | 4480 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:13:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 16322059..16322954 | 903..8 | 4465 | 99.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 03:13:15 has no hits.
FMO12008.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-25 11:41:13 Download gff for
FMO12008.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9917-RA | 289..1204 | 1..918 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:43:38 Download gff for
FMO12008.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9917-RA | 271..1186 | 1..918 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:51:29 Download gff for
FMO12008.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9917-RA | 271..1186 | 1..918 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:51:29 Download gff for
FMO12008.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 16322046..16322957 | 1..918 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:43:38 Download gff for
FMO12008.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 16216079..16216990 | 1..918 | 98 | | Minus |