Clone FMO12010 Report

Search the DGRC for FMO12010

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:120
Well:10
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG18418-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO12010.5prime Sequence

289 bp (289 high quality bases) assembled on 2012-06-25

> FMO12010.5prime
CAGTCGACATGGCGCTGGTTTACGGGGTTGAAATTAAGACGGTACCCACC
CACATGAAATTCGTGATGGGCGGAACCTCCGGAATGCTGGCCACATGCAT
TGTCCAGCCGTTGGACCTTCTCAAGACCCGAATGCAGATATCAGGAACTT
TAGGCACACGCGAGTACAAGAACTCATTTGAGGTTCTATCGAAGGTTTTG
AAGAACGAGGGGATATTATCCTTGTACAATGGATTGAGTGCCGGACTATT
GAGACAGGCCACGTACACATCAGCCAAGATGGGTGTTTA

FMO12010.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:12:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG18418-RA 1142 CG18418-RA 80..362 7..289 1385 99.3 Plus
CG7514-RA 1188 CG7514-RA 138..328 79..275 260 76.1 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:12:56
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 4689709..4689991 289..7 1385 99.3 Minus
3L 28110227 3L 4688447..4688637 275..79 230 75.6 Minus
Blast to na_te.dros performed on 2014-11-28 03:12:57 has no hits.

FMO12010.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-25 11:41:06 Download gff for FMO12010.5prime
Subject Subject Range Query Range Percent Splice Strand
CG18418-RA 73..361 1..288 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:43:26 Download gff for FMO12010.5prime
Subject Subject Range Query Range Percent Splice Strand
CG18418-RA 73..361 1..288 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:51:22 Download gff for FMO12010.5prime
Subject Subject Range Query Range Percent Splice Strand
CG18418-RA 73..361 1..288 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:51:22 Download gff for FMO12010.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 4689710..4689998 1..288 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:43:26 Download gff for FMO12010.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 4689710..4689998 1..288 98   Minus