FMO12010.5prime Sequence
289 bp (289 high quality bases) assembled on 2012-06-25
> FMO12010.5prime
CAGTCGACATGGCGCTGGTTTACGGGGTTGAAATTAAGACGGTACCCACC
CACATGAAATTCGTGATGGGCGGAACCTCCGGAATGCTGGCCACATGCAT
TGTCCAGCCGTTGGACCTTCTCAAGACCCGAATGCAGATATCAGGAACTT
TAGGCACACGCGAGTACAAGAACTCATTTGAGGTTCTATCGAAGGTTTTG
AAGAACGAGGGGATATTATCCTTGTACAATGGATTGAGTGCCGGACTATT
GAGACAGGCCACGTACACATCAGCCAAGATGGGTGTTTA
FMO12010.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:12:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG18418-RA | 1142 | CG18418-RA | 80..362 | 7..289 | 1385 | 99.3 | Plus |
CG7514-RA | 1188 | CG7514-RA | 138..328 | 79..275 | 260 | 76.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:12:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 4689709..4689991 | 289..7 | 1385 | 99.3 | Minus |
3L | 28110227 | 3L | 4688447..4688637 | 275..79 | 230 | 75.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 03:12:57 has no hits.
FMO12010.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-25 11:41:06 Download gff for
FMO12010.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18418-RA | 73..361 | 1..288 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:43:26 Download gff for
FMO12010.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18418-RA | 73..361 | 1..288 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:51:22 Download gff for
FMO12010.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18418-RA | 73..361 | 1..288 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:51:22 Download gff for
FMO12010.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 4689710..4689998 | 1..288 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:43:26 Download gff for
FMO12010.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 4689710..4689998 | 1..288 | 98 | | Minus |