FMO12011.5prime Sequence
1168 bp (1026 high quality bases) assembled on 2012-06-25
> FMO12011.5prime
CAGTCGACATGGCCAAGAACAGCTTTAAGACTTTAATCAGCCAGAAACAC
AAAACGTTTCCGGCGGACCTAAATATGTACGGAATGAAGTGTAAATCGCA
GCTGCTGGAGGATCAGGAGAACGTGACCCTGATCATCAATCGGCGGAACT
CAATCCGCCAGAAGCCGAAGAGTTGGGCTTGGACCCTGCTGCGTTGCAGG
TGGCAAAAGAAGCTAGTTCTCTTATTAATATTTATTTGTGTGTGCGTTCT
GATTGTTTTCGCCAACACGCATCTCTTGGTTCGCGGCAACATCCTCTCGG
CCTTCCTCTCGAGCCGGCTTAACAAGCATTCGCACGCGGAGAAGCAGGAG
GCGAGGTATCCCGACATCCCGGCCACGACCCCGTCAGTTCCCCCGGTGCT
GAGGCCCACGCACTATCTGCTCAACTACTCCTCCACCCAGCTGGAGCTGA
GCTCGCACTTGAACGGTCTGTCCTCAGACTACAACATATTCGTCATCTAC
ACGCGGGAGAACTACCACTTGAACCTTAAGTTCGACCTGTTCGCCCACAG
CTTGCTGAAGCACACCAGTGCCCAGCTGCATCTGCACGTGATCACGGACA
GCGAGAGCCAGCCCTCGGTGCTGGAGATCCTGCAGCGACAGATCAGGCGG
TTCCGGCGGACGGTCATATACACCATATACGACGTGAAGGTCTGCTCCAG
CATCATACAAGACATAGCCGCCAAGTTGTCCCCGTACTTCAGCTCAACCC
CGAACTCGTACTACAGCGACTCCCTCTTTTTCCCTGTCCCTCGGCCTTCA
CAGGATCGCCGACAGGAGCCTAAACAGAGCCATTCTGCTAGATTGTGATA
TAGTCTTCCGATCCGATGTCCGACTGCTGTTCAATGAGTTCGACACTTTC
TGCCGCACCAGCTGTACGGACTGGCACCGGAACTGACCCCGTCTACCGCC
ACATCCTCTACGCTATCGCGTGCGCTATCCGAAGACCAGTTTCGGGAATC
CCTACTATTCGGATCACACGAGGGGGCACTACATAGCGTGTCACCACGGC
TATCCAGGCCTGAACTCGGCGTGTTCTGCTGCTCCTTAAACCGCATCGGT
ACTCAAGGTCCTAACTGGAAAAGCTGACCCACTCGGAGGGTGCAACACGC
CTTGGATCGCCCAAGTAT
FMO12011.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:20:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11388-RA | 1639 | CG11388-RA | 227..1372 | 4..1139 | 5235 | 97.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:20:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 24022569..24023714 | 4..1139 | 4900 | 97.6 | Plus |
Blast to na_te.dros performed on 2014-11-28 03:20:11 has no hits.
FMO12011.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-25 16:45:35 Download gff for
FMO12011.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11388-RA | 193..1359 | 1..1161 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:47:53 Download gff for
FMO12011.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11388-RA | 223..1389 | 1..1161 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:54:56 Download gff for
FMO12011.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11388-RA | 223..1389 | 1..1161 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:54:56 Download gff for
FMO12011.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 24022565..24023731 | 1..1161 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:47:53 Download gff for
FMO12011.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 19910088..19911254 | 1..1161 | 97 | | Plus |
