Clone FMO12018 Report

Search the DGRC for FMO12018

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:120
Well:18
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG13559-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO12018.5prime Sequence

368 bp (368 high quality bases) assembled on 2012-06-25

> FMO12018.5prime
CAGTCGACATGAGTTCCTTCGCCCGGGTTCCCAGCACACCTCCTCCTTCG
TATGAGGAGGCAATGGGCTGGGAAACACGGAGATCACACAGCACCACGTG
GCTGCTCGCGGAGAATACCTCATCACTCATGATCTGTCCAATGTGCCATG
ACGAGATCGAGACGACCACAAAGATCCGGCGCCGCTGGATCGCCTACGTG
GCCTCGGGCATAGTCTTGTTCACCACCTGCGGCATTGGATGCTGGCTAAT
CCCCTGCATCCTCGACTGTTTCAACGAGATCCATCACTCGTGTCCCGTCT
GCAAGGCGACCCTGGGAATCGTTCCGCAGCAGGATCAGAGGTGGCCAACC
GCAAGCTTTCTAGACCAT

FMO12018.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:13:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG13559-RA 870 CG13559-RA 385..726 9..350 1710 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:13:33
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 23503330..23503671 9..350 1710 100 Plus
Blast to na_te.dros performed on 2014-11-28 03:13:34 has no hits.

FMO12018.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-25 11:41:19 Download gff for FMO12018.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13559-RA 1..345 9..354 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:43:48 Download gff for FMO12018.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13559-RA 385..732 9..359 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:51:38 Download gff for FMO12018.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13559-RA 385..732 9..359 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:51:38 Download gff for FMO12018.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 23503330..23503677 9..359 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:43:48 Download gff for FMO12018.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 19390853..19391200 9..359 98   Plus