FMO12021.5prime Sequence
1182 bp (1013 high quality bases) assembled on 2012-06-25
> FMO12021.5prime
CAGTCGACATGTGCGCAATCGAAGATCGAAAGGTCCTCAAGATGGGGCTC
ACTCTTGTGTGCCTGACTTTACTGGCCATTCACATGGCAGATGCGGTTGT
GCAGCACAGATCCTTGGAGGATGCTCGACAGGAGCGCCAGCGATTGGTGC
ACAGGTACACAAAGGTCCTGAACAAGGAGGAGGGAGCCATAAGACTGGTG
GGCGGAGATAATGAGTACGAAGGCAACATTGAGGTCCTGCACAATGGCAA
GTGGGGAGCAGTTTGCGATGACGAGTGGGATTCCACCGAAGCAGACATTG
TGTGCCGACAACTGGGTTTTCCCGGCATGCGGAGGTATACGAGAAGTGGC
TTCTTTGGACCCGCTCGTCGTCGCTTCTGGATGGACAACCTCTTTTGCGA
GGGTCACGAGCAGGAACTAGTGGATTGCCATTTCGAGGGCTGGGGCGAGA
ACGATTGTGAACCAGGAGAGGCGGCTGGCGTGGTCTGTTACCCGCCGGAA
AATGCACTGATCCCCATGGCAACACCCATCATCCGCGACGAGGATTTGCC
CAAGTACCCGATTCATTCGCGATCACGTTTATACGTGAGACTGCGAGGCG
GAAGATCGCGGATCGAGGGACGAGTGGAGGTCAGTTTGGATGGCGGTCGA
TGGGGCAGTGTGTGCGCCGATGGCTGGTCACTTTTGGAGGCCAATGTCGT
GTGCCGACAGCTCGGCCTGGGCTATGCCAGCGAGGCCTTCCAAACCGATT
TCTTTGGTGGCTTCAATGTGTCAAGACCCGTGCTGAGTGGCAGCGAATGC
TATGGCAACGAAAACGGAACTGGCTGACTGCCTGCATCATGATGCAAGTC
AGGTATCATCAGCTGTCATGGCAATCGGCAGCACGTGGCCCGCTGTGATC
TGTGACTATTATCGCCCCCCGATCTTGGTGGTTGGATATCTGGAAATCGA
AACAGACGGCCCCATTCTGAAGGATAAGACCCATGCTTGCTGATGCCAGT
GCGCCATGGAGAAAATCGGTGTTGGCCCAACGAGGCCGTATCAAATCCAA
CGGGAATGATTCCCCCACTTGGCGGTTTATCAGATCTAGGGCGGTTTGCC
TCAAGTTTCCGGGCAGCTCGCCCTTCAATGGCGGGGGCATGGCTGGAAAT
TTCCGGTAATTCCAGGGAGAAAAAGCCAATTG
FMO12021.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:20:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
lox2-RA | 1729 | CG4402-RA | 30..1115 | 9..1118 | 4790 | 96.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:20:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 21790418..21791239 | 1055..221 | 3365 | 97.1 | Minus |
2R | 25286936 | 2R | 21791337..21791551 | 223..9 | 1075 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 03:20:38 has no hits.
FMO12021.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-25 16:45:40 Download gff for
FMO12021.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
lox2-RA | 98..1204 | 1..1135 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:48:10 Download gff for
FMO12021.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
lox2-RA | 23..1129 | 1..1135 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:55:09 Download gff for
FMO12021.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
lox2-RA | 23..1129 | 1..1135 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:55:09 Download gff for
FMO12021.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 21790348..21791237 | 223..1140 | 95 | <- | Minus |
2R | 21791338..21791558 | 1..222 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:48:10 Download gff for
FMO12021.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 17677853..17678742 | 223..1140 | 95 | <- | Minus |
arm_2R | 17678843..17679063 | 1..222 | 98 | | Minus |