FMO12024.5prime Sequence
1142 bp (1024 high quality bases) assembled on 2012-06-25
> FMO12024.5prime
CAGTCGACATGGCGTTGACTTACATCCTTTTCCAAGTGGCGGTCGCCCTA
CTGGCGATCTTAACGTACTATATCCACCGCAAGCTAACATATTTCAAGCG
TCGAGGGATTCCCTTCGTTGCACCGCATCTCATCAGGGGAAACATGGAGG
AATTACAAAAGACGAAAAATATCCACGAGATATTCCAAGATCACTATAAC
AAATTCAGGGAAAGCAAGGCACCGTTTGTTGGATTCTTCTTTTTCCAGAG
TCCCGCTGCATTTGTGATAGATCTTGAACTGGCCAAGCAAATACTGATTA
AGGACTTCTCGAATTTCTCGAACAAGGGTATATTCTACAATGAAAAAGAT
GATCCCATTTCTGCCCATCTCTTCAATCTGGACGGTGCCCAGTGGCGTTT
GTTAAGGAACAAATTATCATCGACCTTTACATCCGGTAAAATGAAGTTAA
TGTATCCGACCGTAGTGTCAGTGGCCAATGAATTTATGACCGTGATGCAC
GAGAAAGTGCCGAAAAATTCGGTTCTGGAGATACGTGATCTGGTGGCCAG
GTTTACGGTGGATGTGATCGGAACCTGCGCCTTTGGCATCCAGTGCAACA
GTCTGCGCGATGAAAAGGCCGAGTTTCTGTATTTTGGAAAGAGGTCTTTG
GTTGACAAGAGACATGGGACTCTATTGAATGGCTTTATGCGCAGCTATCC
CAAATTGGCCAGGAAATTGGGTATGGTTCGAACTGCACCGCATATTCAGG
AATTCTATAGTAGAATTGTCACAGAAACAGTGGCGGTGCGAGAAAAAGAG
CACATCAAACGCAACGATTTCATGGACATGCTGATTGAACTTAAAAATCA
AAAGGAATGACTCTAGAGAATGCGATGTGGTCAGAGGATTATCATGGAGG
AGGTTTTGGCACAAGCCTTTGTGTTCTTCATTGCTGGCTTTGAGACATCC
TCCTCACCATGGGATTTGCCCTATACGACCTGCAAAGATTCTGGACATTC
AAGATAAGTTCGGGCTGAGTGAGAGTCATAGAGCACATGACCAAACTTAC
CTACGAGTGCACCAGGATCTGAGTACCTCATCAGTTTAATGAACCCTCTG
CGAACTGTTACACCAATTGGTGCCAATCTTGGAATCGAAATT
FMO12024.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:20:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cyp6a8-RA | 1781 | CG10248-RA | 30..1153 | 8..1115 | 5020 | 97.6 | Plus |
| Cyp6a18-RB | 4171 | CG13977-RB | 40..1010 | 16..982 | 1410 | 77.4 | Plus |
| Cyp6a18-RA | 1730 | CG13977-RA | 40..1010 | 16..982 | 1410 | 77.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:20:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 14887964..14888981 | 1019..8 | 4730 | 99 | Minus |
| 3R | 32079331 | 3R | 27478714..27479684 | 16..982 | 1285 | 76.2 | Plus |
Blast to na_te.dros performed on 2014-11-28 03:20:25 has no hits.
FMO12024.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-25 16:45:38 Download gff for
FMO12024.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp6a8-RA | 23..1124 | 1..1087 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:48:03 Download gff for
FMO12024.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp6a8-RA | 24..1125 | 1..1087 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:55:03 Download gff for
FMO12024.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp6a8-RA | 24..1125 | 1..1087 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:55:03 Download gff for
FMO12024.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 14887912..14888984 | 1..1064 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:48:03 Download gff for
FMO12024.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 10775417..10776489 | 1..1064 | 98 | | Minus |
