FMO12025.5prime Sequence
894 bp (894 high quality bases) assembled on 2012-06-25
> FMO12025.5prime
CAGTCGACATGGCTAATTGCAATCTGGTTAAAGTATTTCTGTTGGTAACA
TTACTCGGCCTAAGTCTTATGCCATTTTGCCAGGCACATCCAAAACGCGG
TCGTAAGCGTGCCTTTGGTGTGGGTCTTTTGGGTGGAGCTTTAGCTGGCG
CTGTCATTGGCAACGTTGTGGCCAAGTCTCAACAGGCTCCCGCTGCCGCT
CCTGCTGCTCCGGTAGCCGTAGTGCATCACCACTATCCGCCAGGTGCTCC
TGCAGCACCTGCTCCGGCATCCCAGCCAGATCCCAAAAAGATGACTGTCA
TCGAAACTGGCACACCCGATGCCAACGGATGCTACACGCAAACTATTCGG
GAACCCAATCCCAGCAATCCAAAGTCCTATACGGAGACACAGCACCTGAT
CTGTCCCACGCTGCAGCAGGCCAACCAGCCTGCACCAGCAATCGCTCCAA
GTATTGCCCAGGTTCCTGTGATGCCGCAGCCCTCACCAGTTTTCCCTGCG
GTATCTCCAGCTGCTGCTCCGGCCAATGTTGCTCCAGCTCCTGCTGCTCC
TGTTGCTCCGGCTGCCCCAGCTGCCCCTGTGGTGCCTGTCGCTCCAGCTG
CCCCTTCTGTTGTTCCTGTCGCTCCTGTCGCCCCTGTAGTGGTTCATCCT
GCTGCCCCCATACTCGTCCATCCTGCTCCAGTTCCAGTGGCAGCTCCAGC
TCCGGCCCCGATTGCTCCCGCAGTTCAGCAAATCCTGGTCAGCCACAGGT
TATCCTACTCTCAAAGAAAACCGTTTATTATCCCAAAAAGCGATCATCTG
CACCCACACTGAATACTCCGCAGGGAGTGCTAGCCATGCTAGTGATTTTC
TACTCAATCAAGGCTTTTACACTTGCAAGCTTTCTAGACCATTC
FMO12025.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:13:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31496-RA | 1030 | CG31496-RA | 84..951 | 8..874 | 4315 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:13:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 7345517..7346275 | 117..874 | 3745 | 99.9 | Plus |
| 3R | 32079331 | 3R | 7345152..7345263 | 8..119 | 560 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 03:13:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2767..2955 | 695..510 | 183 | 57.8 | Minus |
FMO12025.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-25 11:41:24 Download gff for
FMO12025.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31496-RA | 84..955 | 8..879 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:43:58 Download gff for
FMO12025.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31496-RA | 84..955 | 8..879 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:51:46 Download gff for
FMO12025.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31496-RA | 84..955 | 8..879 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:51:46 Download gff for
FMO12025.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 7345152..7345261 | 8..117 | 100 | -> | Plus |
| 3R | 7345518..7346279 | 118..879 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:43:58 Download gff for
FMO12025.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 3170874..3170983 | 8..117 | 100 | -> | Plus |
| arm_3R | 3171240..3172001 | 118..879 | 99 | | Plus |
