FMO12032.5prime Sequence
1152 bp (1018 high quality bases) assembled on 2012-06-25
> FMO12032.5prime
CAGTCGACATGCGCACGCACACCCAGGAGCGGCCCTACAAATGTCCGGAA
GATGACTGCGGCAAAGCCTTCACCGCCTCGCATCACCTGAAGACCCACCG
AAGGACACATACAGGCGAAAAGCCGTATCCCTGCCAGGAGGACAGCTGCC
AAAAGTCGTTTAGCACATCGCATAGTTTGAAATCCCACAAAAAGACTCAC
CAGCGACAATTGCAAAACAAGGGTCGCAAGAAAAGGCCACTAAAGACGCA
GCAGACCAAGTGCAGCGATCAGGAGCAGAAGGATCCACAGCAGGAGGAGC
AAGAGGAAGAGGAGTTCATTAAAGAGGATCAACCCGAAATGACGTTGTTA
AATCCAGGCAGTCACTGCTCCGAAACCACCAGCACGGACAGCGGAGTGGT
GCTGCAAACTCTCACGCCGCAGGATCACTTGTCCAATGTGTTTATCCTAC
AGGGCAACGAGCCTCTGATCCTTCCAGAAACATCACAGGCTTACCAGCTC
TCCTACGCCGCCGAGGAGGAAATACCCAGTCCGTGGATTGACGCCGGCGT
CCTTGTCTCTAAGCCCATCATTCCCATGGCTCCGCTGACGGATGCCTGCG
TGGCCTTGCCCACCGAGATGCCCAGTTTCGTTAACCTGAAGCCCACATTC
GGCAATGCAGTAAGCGGCAATATGGGGGATCCGCAGCCGGAGACCATGGA
TGTGGATCCCACAGTGGAAACCTCACTGCCCACGCCCACCTTGGAGTTGA
ATCAGCCAAATATCGAAGAGCTGCTCAAGCAGGACAGTTTCGAGAACGAG
GAGGACATGGAAACGGAGTCGCTTCTAAATGACATCCTCATGACCATCGA
CAACAACAGTGCGCTGCTGCAGCCACACTCCAGCAGGCCTCACAGGTGCC
AAGCGATGCCTCCGGCTTGGTGGAACTGGACATACGGGACACAAGCCGAC
TTCTGAGCAGATCACAGCGGATGCGGCATCTTGCAATTGCACCAACTGCC
AGGTGCGATCAGACAAAGAGCTTGTCATGGGGGGTGACTGTGGGTGCTGC
AGCTGCTCAACAGACCACCAGGACTGGGCGCACCCACCACAACAACACGA
CAACACGATGGATTTCCACGGTGGCAACGAATTGCGGCAGCGGGGGCCCA
CA
FMO12032.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:14:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| MTF-1-RG | 3523 | CG3743-RG | 1022..2166 | 9..1151 | 5255 | 98.1 | Plus |
| MTF-1-RF | 3182 | CG3743-RF | 1519..2663 | 9..1151 | 5255 | 98.1 | Plus |
| MTF-1-RE | 2812 | CG3743-RE | 318..1462 | 9..1151 | 5255 | 98.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:14:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 9436210..9437295 | 9..1097 | 4940 | 98.4 | Plus |
Blast to na_te.dros performed on 2014-11-28 03:14:02 has no hits.
FMO12032.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-25 11:41:29 Download gff for
FMO12032.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MTF-1-RC | 1483..2633 | 1..1151 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:44:03 Download gff for
FMO12032.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MTF-1-RC | 1513..2663 | 1..1151 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:51:52 Download gff for
FMO12032.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MTF-1-RE | 312..1462 | 1..1151 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:51:52 Download gff for
FMO12032.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 9436204..9437284 | 1..1085 | 98 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:44:03 Download gff for
FMO12032.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 9429304..9430384 | 1..1085 | 98 | <- | Plus |
