FMO12036.5prime Sequence
341 bp (341 high quality bases) assembled on 2012-06-25
> FMO12036.5prime
CAGTCGACATGTCTCTCGTGGATAAATTAAACTATTACAGCACACGAAAA
TCGTTCAAATATGGCATACCCTTCCTCATCATGATGGTGGCTGGCTCCTT
TGGACTGCAGCAGTTCTCCAACCTCAGGTATCAGTACGCCAAGAAGCAGC
CGGTAACGCCGGAGGAGATGAAAAAGTACGGCGTAAGCATGAAAAACCGC
AAGGATGTGACGTTGGAGTCGGAGTACGACAAAGTCAAGTCCGTGGACAT
AGAGAACTGGGAGAACAAACGCGGTCCACGTCCCTGGGAGGAGCAGGAAG
ATCAGCCGACGACAGCGAAGCACGCAAGCTTTCTAGACCAT
FMO12036.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:13:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
l(3)neo43-RC | 627 | CG14865-RC | 48..362 | 9..323 | 1575 | 100 | Plus |
l(3)neo43-RB | 460 | CG14865-RB | 48..362 | 9..323 | 1575 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:13:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 15278246..15278444 | 323..125 | 995 | 100 | Minus |
3R | 32079331 | 3R | 15278502..15278621 | 128..9 | 600 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 03:13:48 has no hits.
FMO12036.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-25 11:41:23 Download gff for
FMO12036.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
l(3)neo43-RB | 1..330 | 4..331 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:43:55 Download gff for
FMO12036.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
l(3)neo43-RB | 1..330 | 4..331 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:51:44 Download gff for
FMO12036.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
l(3)neo43-RB | 43..369 | 1..331 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:51:44 Download gff for
FMO12036.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 15278239..15278443 | 126..331 | 98 | -> | Minus |
3R | 15278502..15278626 | 1..125 | 94 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:43:55 Download gff for
FMO12036.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 11103961..11104165 | 126..331 | 98 | -> | Minus |
arm_3R | 11104224..11104348 | 1..125 | 94 | | Minus |