FMO12042.5prime Sequence
1001 bp (1001 high quality bases) assembled on 2012-06-25
> FMO12042.5prime
CAGTCGACATGAATAACTCCAAACGCTCGCGACTCAGCGACAAGGATGAA
GGTCCGTGCAAAATTCGAAAAGCGACCAACCTGTCGGATAAGAAGGCAAT
CGTAGATCTATTCTCTAGTTTCGTGAATACACATCATTTTCGACCCAACC
CCGATGGTCAGAGGATTGATAAAATAATTGTAATAAAGTTAGTGGAACGC
TTAGAAACTACAGATGTAAATGATCGCAAATTTATGCAGAGTATATTGCG
GCGCGTCTATTTAAAGTGCACCGACTTGCGTCTATTTATTCGAAATCAGC
TCAACGATGTATTCTTTCGATTGATTTTCGAAGGAACTGACTTTCATTGC
ATCCCAGAAATTCTGGAAATTTACTATGATATAATCAAGGGATTTACTCA
ACCATATGAGACTGAACATGAGCAACTGCTCTTTAAGATCCTTTTGCCTT
TGCACAAGCCGCCATCGTTAACAAAGTATTTTCATCAGCTGATAAAATGC
ATTATTGCATTCCTTAACCAATATCCATCTTTCATTGAAAAATATGTCAA
AGGTCTTCTACGGCTCTGGCCGAAGACGTCCTTTACTAAGGTGACATTGT
TTCTAAGCGAGATTGCCAGAATTTTGGTAATAAAAAATGAGCAAGAGGTC
AAGAAAGTCATGCTGACGATTTTTAATCATATTGCAAAATGTCTGTGTGA
TGAAAGCAATAAGATAGCCGAGCACACTCTTCTTTTGTGGAAAAACAATG
CGGTTTTGGAGGTTATACATCGAAACCACGCGCTCATCATGCCCATTGTA
TATCCACACGTATTACGCGTATTGATACGTCATTATATGAGAAAACCAAT
GCAACGAATGCCTCCATTGCTTTATGTACTTTACTAAAAATGAACAATCC
GATGCTTAGATGCCTGACTACTGTATGCATGAGCACCGATCATAGACCGA
TGAAACACGACGCCGAGAATTCTATACCTAACGCAAGCTTTCTAGAACCA
T
FMO12042.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:21:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32568-RC | 1818 | CG32568-RC | 99..1072 | 9..981 | 4845 | 99.9 | Plus |
| CG32568-RB | 1539 | CG32568-RB | 99..1072 | 9..981 | 4845 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:21:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 16741524..16741857 | 380..713 | 1670 | 100 | Plus |
| X | 23542271 | X | 16741902..16742172 | 712..981 | 1305 | 99.6 | Plus |
| X | 23542271 | X | 16741237..16741429 | 187..379 | 965 | 100 | Plus |
| X | 23542271 | X | 16741004..16741183 | 9..188 | 900 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 03:21:10 has no hits.
FMO12042.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-25 16:45:46 Download gff for
FMO12042.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32568-RB | 99..1079 | 9..990 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:48:28 Download gff for
FMO12042.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32568-RB | 99..1079 | 9..990 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:55:26 Download gff for
FMO12042.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32568-RB | 99..1079 | 9..990 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:55:26 Download gff for
FMO12042.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 16741004..16741183 | 9..188 | 100 | -> | Plus |
| X | 16741239..16741429 | 189..379 | 100 | -> | Plus |
| X | 16741524..16741857 | 380..713 | 100 | -> | Plus |
| X | 16741904..16742172 | 714..981 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:48:28 Download gff for
FMO12042.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 16635037..16635216 | 9..188 | 100 | -> | Plus |
| arm_X | 16635272..16635462 | 189..379 | 100 | -> | Plus |
| arm_X | 16635557..16635890 | 380..713 | 100 | -> | Plus |
| arm_X | 16635937..16636205 | 714..981 | 99 | -> | Plus |
