FMO12043.5prime Sequence
692 bp (692 high quality bases) assembled on 2012-06-25
> FMO12043.5prime
CAGTCGACATGAGCCAAATCAGCAAACTAACCCACATAAGCCGCATAAGC
CAAAACAATCAGTCGGACGGGAGTGATGAGGATAAGTTTCGCCGTGCGAA
TTTTCCGGTTTACCCAAAACCGCTACCTGATCGAGATTTGAGCTACAAAG
CTGACGAAAATGAGTTCACAATGGTGGAGAAGGCGTCCTTGCGGAATGCC
TGGCGTTTAATTGAGCCATTTCAGCGCCGATTTGGCAAGGAAAATTTTTA
CAGTTTCCTTACGAGGAACGAGGATCTCATAAACTTTTTCAGGAAAGATG
GAAAGATTAACCTGAGTAAGCTGCACGGGCATGCCATGGCAATGATGAAG
CTGATGTCAAAGCTGGTCCAAACACTGGATTGCAATCTAGCTTTCCGCTT
GGCCTTGGATGAGAATCTTCCCACACATCTGAAGAATGGCATCGATCCGG
ATTATATGAGGATGCTGGCCACCGCACTGAAGAGTTATATCCTTGCGTCT
TCCGTTATCGAAAATCACAACTCATGTTCACTAAGCAATGGTCTGGCCCG
TCTGGTGGAGATCGTCGGTGAGTACGCCGTTGTGGATGAGGCTAGAAAAA
GAGCCATGTCCACTGCCCTTAGGACGACTGTTGACGATGCTGGCAATCGC
ATTGTCAAGGTTGCTTTAGGCACTGCAAGCTTTCTAGACCAT
FMO12043.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:21:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| glob2-RB | 823 | CG15180-RB | 77..742 | 9..674 | 3330 | 100 | Plus |
| glob2-RC | 2336 | CG15180-RC | 77..635 | 9..567 | 2795 | 100 | Plus |
| glob2-RD | 784 | CG15180-RD | 310..703 | 281..674 | 1940 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:21:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 6608594..6608838 | 253..9 | 1225 | 100 | Minus |
| 3R | 32079331 | 3R | 6607994..6608207 | 674..461 | 1070 | 100 | Minus |
| 3R | 32079331 | 3R | 6608334..6608543 | 461..252 | 1050 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 03:21:13 has no hits.
FMO12043.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-25 16:45:47 Download gff for
FMO12043.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| glob2-RB | 70..745 | 1..678 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:48:31 Download gff for
FMO12043.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| glob2-RB | 70..745 | 1..678 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:55:28 Download gff for
FMO12043.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| glob2-RB | 70..745 | 1..678 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:55:28 Download gff for
FMO12043.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 6608594..6608843 | 1..253 | 98 | | Minus |
| 3R | 6607990..6608206 | 462..678 | 99 | <- | Minus |
| 3R | 6608334..6608541 | 254..461 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:48:31 Download gff for
FMO12043.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 2433712..2433928 | 462..678 | 99 | <- | Minus |
| arm_3R | 2434056..2434263 | 254..461 | 100 | <- | Minus |
| arm_3R | 2434316..2434565 | 1..253 | 98 | | Minus |
