FMO12046.5prime Sequence
750 bp (750 high quality bases) assembled on 2012-06-25
> FMO12046.5prime
CAGTCGACATGTCGGTCAGGAAGTTGAGTGCCCTATCGCTCTCCATTGGT
GGAGTTCCGTTGATTCCAAGTGTTTCCTTGGTAGCTGCGGCCAATGGAGA
GAGTAGGGATTGCCATGGCACGATCTGTCATCCGGTCAATGAATTTTGCT
ATGTTGCAACGGAGAGATGTCATCCGTGCATCGAGGTCTGCAATAATCAA
ACCCACAACTACGATGCGTTTCTGTGCGCCAAGGAATGTTCAGCTTACAA
GACATTTGAGCCGTTAAAAGCCGAGATGCTGGACATCCAGAATACCCAGC
AGCTGATCCTCTTGCTGCTGACTATCCTTCTCGTCCTGATTGCGCTTCGT
TGCGCGTTTCAGTTCCTTCGATGGCTGATAGGCAATCGGTGCTTCCAGAA
GCTGATGCGCCGTCTCCAATCGAAGGCCTACCCTCATCCGGCAACTGCAA
ATGGAAAGGATCTTAATGCTACCACCATACAGAATCTGAATGCCATTAAC
CATCCCGGCAGCGACCTTGAGCGGGCACAATCACAGATCTACAGTGTGGC
AGGTGCTGCCGAGGGTTCCGTTGTGACTATGACAACGCCGGTGAGCACTC
GCTATCCGGCGGAAAACAGTACCACGCCCACAACGGTTATGACGGAGATC
GGATACGGATACGATAATCAGGCCATGGTCGTAACGCCGGTTTCCGAGAA
AACCCTCAGCAGCGACGATTCCCGTCGCTTTCGCAAGCTTTCTAGACCAT
FMO12046.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:21:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10176-RC | 2100 | CG10176-RC | 552..1274 | 9..732 | 3595 | 99.9 | Plus |
| CG10176-RB | 1789 | CG10176-RB | 552..1274 | 9..732 | 3595 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:20:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 18486623..18486936 | 241..554 | 1570 | 100 | Plus |
| 2L | 23513712 | 2L | 18485968..18486202 | 9..243 | 1175 | 100 | Plus |
| 2L | 23513712 | 2L | 18487014..18487195 | 550..732 | 865 | 99.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 03:20:59 has no hits.
FMO12046.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-25 16:45:44 Download gff for
FMO12046.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10176-RB | 509..1241 | 1..737 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:48:22 Download gff for
FMO12046.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10176-RB | 546..1278 | 1..737 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:55:20 Download gff for
FMO12046.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10176-RB | 546..1278 | 1..737 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:55:20 Download gff for
FMO12046.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 18487017..18487199 | 553..737 | 98 | -> | Plus |
| 2L | 18485962..18486202 | 1..243 | 98 | -> | Plus |
| 2L | 18486626..18486934 | 244..552 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:48:22 Download gff for
FMO12046.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 18487017..18487199 | 553..737 | 98 | -> | Plus |
| arm_2L | 18485962..18486202 | 1..243 | 98 | -> | Plus |
| arm_2L | 18486626..18486934 | 244..552 | 100 | -> | Plus |
