FMO12047.5prime Sequence
695 bp (695 high quality bases) assembled on 2012-06-25
> FMO12047.5prime
CAGTCGACATGGCATCCGCTACGGTAAGAAATGTGCCGCTGCTCGACGAT
GACACGATACCCTTTGGCGAGGAGGACGAGATGCGGGATCCCAGTCGCGC
GGGTCAGAAATACACGCACCCGTACGTCACCTTCTTCCACCTGTTCTTCA
GGGGCGCCGCCATCCTGATCTATATGTTCTGCGGTTGGTTCAGCGACTCC
TTCATCACCAGCTTCGTTTTCGTGGTGCTCTTCCTGTCCGCCGACTTCTG
GACGGTGAAGAACATCTCGGGCAGATTGCTGGTCGGTCTCCGCTGGTGGA
ACTACGTCGACGACGATGGCGTATCGCACTGGGTGTTTGAGTCAAAGAAC
TCTGAATCCTACCAGAGTCGGGTCAACAAGAACGAGCAGCGCATCTTCTG
GCTGGGACTCATCCTCTGTCCCGTCTTCTGGGGCCTCTTCTTCCTGTTCG
CCCTATTCGGCCTGAAGTTCAAATGGCTACTGCTGGTAATGATCGCCATT
GCGCTGAATGCCGCCAATCTGTATGGCTACGTCAAGTGTAACTATGGTGC
CAATAAGGATCTGAATTCCGCCGCCACAGACTTTGTGAATACGCAGTTCT
TCAAGAATGCTGTGGACATCATGACAAGGCCCAGTGGCGCCCCACCGCCA
ACAAATGTACGCCCGACGGGAGTCGTTGCAAGCTTTCTAGACCAT
FMO12047.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:14:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5021-RC | 1088 | CG5021-RC | 140..809 | 8..677 | 3320 | 99.7 | Plus |
CG5021-RD | 1022 | CG5021-RD | 156..800 | 33..677 | 3195 | 99.7 | Plus |
CG5021-RA | 933 | CG5021-RA | 140..794 | 8..677 | 3085 | 97.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:14:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 8967566..8967892 | 351..677 | 1605 | 99.4 | Plus |
3L | 28110227 | 3L | 8967278..8967516 | 112..350 | 1180 | 99.6 | Plus |
3L | 28110227 | 3L | 8967128..8967211 | 33..116 | 420 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 03:14:05 has no hits.
FMO12047.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-25 11:41:32 Download gff for
FMO12047.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5021-RC | 123..804 | 1..684 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:44:06 Download gff for
FMO12047.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5021-RC | 134..815 | 1..684 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:51:54 Download gff for
FMO12047.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5021-RC | 134..815 | 1..684 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:51:54 Download gff for
FMO12047.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 8967128..8967210 | 33..115 | 100 | -> | Plus |
3L | 8967282..8967516 | 116..350 | 100 | -> | Plus |
3L | 8967566..8967898 | 351..684 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:44:06 Download gff for
FMO12047.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 8960228..8960310 | 33..115 | 100 | -> | Plus |
arm_3L | 8960382..8960616 | 116..350 | 100 | -> | Plus |
arm_3L | 8960666..8960998 | 351..684 | 98 | | Plus |