FMO12051.5prime Sequence
275 bp (275 high quality bases) assembled on 2012-06-25
> FMO12051.5prime
CAGTCGACATGCCGGTGGCTGTACGTCTAGTAGAGGTCTTGACCCTGATC
ACCATTATGGGTCTAATTACATGCATTGGTCTCAGCGTGATTTTGGCCCA
AAAGACACTCAGTATGACAATAACATTTCTCGAGCCCGCAGCGAATATTG
CCAATATGGTGCTAGTTGTAACCGAGAAAATACTGGTGTCCTCGCTGCTC
TGCGTTTTGAGTCTCACAAATGCGGTGGGAAATGCCCTGCATGTGGCTGG
AATCGCCGCAAGCTTTCTAGACCAT
FMO12051.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:14:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34204-RA | 486 | CG34204-RA | 146..394 | 9..257 | 1245 | 100 | Plus |
| CG34204-RB | 479 | CG34204-RB | 146..387 | 9..257 | 1130 | 97.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:14:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 21796540..21796665 | 9..134 | 630 | 100 | Plus |
| 2R | 25286936 | 2R | 21796725..21796849 | 133..257 | 625 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 03:14:31 has no hits.
FMO12051.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-25 11:41:43 Download gff for
FMO12051.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34204-RA | 83..338 | 1..257 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:44:23 Download gff for
FMO12051.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34204-RA | 139..394 | 1..257 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:52:07 Download gff for
FMO12051.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34204-RA | 139..394 | 1..257 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:52:07 Download gff for
FMO12051.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 21796533..21796665 | 1..134 | 97 | -> | Plus |
| 2R | 21796727..21796849 | 135..257 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:44:23 Download gff for
FMO12051.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 17684038..17684170 | 1..134 | 97 | -> | Plus |
| arm_2R | 17684232..17684354 | 135..257 | 100 | | Plus |
