FMO12054.5prime Sequence
1134 bp (1000 high quality bases) assembled on 2012-06-25
> FMO12054.5prime
CAGTCGACATGGGTGTGGACAAGCTGCCCGAAATTCGAGCTCTTAGTGAA
GTGGTTGAACCCCACGTTTCAGGGTCCCGCCTCCTTAATTATCACACAAG
CAGTCTGACGAAACCGGGCGATAACTACGGAAGCGTTCTCCTGGCAATTC
ATGCCCGGCTGCAGAAATCCAATGGTGAGTCGTTTGAAGAGCAGCTGGTG
GCTAAAGTGCCTCCGATCGACCCCAAGTACTGGCAGTTTTTCCAGCCTGA
GCAGACATGCCTCACTGAGAACGCTGTTTACAAGATTTTGGCCCCTGCTC
TGGCCACCCTTCAAGATGAAGCTGGCGTCCCTGACGAGAGCCAATTTAAA
GGATTCCCTCGCTTCTATGGCTGTCGCGAATCCCTCGAATCCAACTCATC
AAAGGTAGATCAAAATGCCGTGTTGGTGCTGGAAAATTTGCGTAGCAGTG
GCTACGTCTCCGGCCAGAGGCTAAAAGCTTTCGATCTGGCCCACACGTTG
CTAGCACTTAAATATATGGCCGAGTTCCACGCCCTGTCTCTAGCTCTGCG
GATCCTCAGACCAGAGGTGTTCCGGGAACAGGTCCGTCCGTTCTTTAAAA
AGTTCGATTGGCATGCTGAAGCGCCCGAGTGGAAGTCGGTAATGAAGGCA
GAGACTCTGGAGGACATTCGTCGAGCCACCAACAACGACTCCAGACTTGT
AGCCCGAATGAAAGAGTTGTCGGACCAGTTTTTTGAATTCTTAGCAGCCG
CCCCAGATAGACCCGATGGGCCTTTTACCAGCATTATACACTGTGACTTC
TGGATAAATAATATAATGTTTCGTTACGGGCCCACTGGAACACCCGTCGA
GCTGAAAATTATCGACTTTCAGACGGCACAGTACGATTCAGTGGTGCATG
ACATAATCTCGTTTTTGCTATCAAGCGTTGATACGGCTATCTGAGTAGAG
TTCGAACAATGTAGAGGCCTGCTATGAGCTTTTGAGCGTTGTCTGCACGT
GTGGGAGCTAAATTGAGTCACCACTTTTAAGAGTTCCGCTGAATGAAGAG
GGTGGCGTACTAACAGGTCCCCACGCATCTTTATGACCGCCTTATATTGC
TGAAATGGTCTTATCGGCATTCAGCTGAGACGCC
FMO12054.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:21:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31976-RB | 2206 | CG31976-RB | 58..1166 | 7..1099 | 5045 | 97.9 | Plus |
CG31975-RC | 2206 | CG31975-RC | 58..1166 | 7..1099 | 5045 | 97.9 | Plus |
CG31975-RB | 1335 | CG31975-RB | 58..1166 | 7..1099 | 5045 | 97.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:21:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 140113..140935 | 829..7 | 4115 | 100 | Minus |
2L | 23513712 | 2L | 139761..139955 | 1015..828 | 650 | 94.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 03:21:33 has no hits.
FMO12054.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-25 16:45:50 Download gff for
FMO12054.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31975-RC | 51..1166 | 1..1099 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:48:42 Download gff for
FMO12054.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31976-RB | 51..1166 | 1..1099 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:55:36 Download gff for
FMO12054.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31975-RB | 51..1166 | 1..1099 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:55:36 Download gff for
FMO12054.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 140114..140938 | 1..828 | 99 | | Minus |
2L | 139741..139954 | 829..1032 | 93 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:48:42 Download gff for
FMO12054.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 139741..139954 | 829..1032 | 93 | <- | Minus |
arm_2L | 140114..140938 | 1..828 | 99 | | Minus |