FMO12055.5prime Sequence
437 bp (437 high quality bases) assembled on 2012-06-25
> FMO12055.5prime
CAGTCGACATGTCCAATTTGCGGCGCCAGGTTCTCAGTGCTTTCAAGAAG
CTCCACCGTACACGACAATACGTTTTTCAGGGGGATGCCAATGCTTTGGC
GGCGGGACGACTAAAAATCAACGAATCTTTCCTGCAGAATCGTAATGAAA
GCAGCGAGGATGAAATTCAAAAGATGATCAAGCTGGCGCAGGACGTGGAT
TTGGAGCTGCGAACGAATGTCATCCAAGCCCAGAAAAAAGAGGATGGTGT
TTATGAACTAAGGATCACGCCAGAGACAACGCGACTCGACAATGTGGTCT
TTAATCCTGACGCAATTATCGAAAAACCGCGCAGGCAACGCGGCGACAAA
AACACTGAAGGTTGCTGCGGTGGCGCTGCGATGGCGGCGCTGGAAGCCGA
AGTCCAGGCCCGCAACAAAGCAAGCTTTCTAGACCAT
FMO12055.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:14:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34150-RB | 495 | CG34150-RB | 16..426 | 9..419 | 2055 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:14:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 24814697..24814861 | 255..419 | 825 | 100 | Plus |
3R | 32079331 | 3R | 24814345..24814492 | 26..173 | 740 | 100 | Plus |
3R | 32079331 | 3R | 24814551..24814634 | 172..255 | 420 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 03:14:38 has no hits.
FMO12055.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-25 11:41:46 Download gff for
FMO12055.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34150-RB | 16..429 | 9..423 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:44:27 Download gff for
FMO12055.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34150-RB | 16..429 | 9..423 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:52:10 Download gff for
FMO12055.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34150-RB | 16..429 | 9..423 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:52:10 Download gff for
FMO12055.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 24814277..24814297 | 9..29 | 100 | -> | Plus |
3R | 24814349..24814492 | 30..173 | 100 | -> | Plus |
3R | 24814553..24814634 | 174..255 | 100 | -> | Plus |
3R | 24814698..24814864 | 256..423 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:44:27 Download gff for
FMO12055.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 20639999..20640019 | 9..29 | 100 | -> | Plus |
arm_3R | 20640071..20640214 | 30..173 | 100 | -> | Plus |
arm_3R | 20640275..20640356 | 174..255 | 100 | -> | Plus |
arm_3R | 20640420..20640586 | 256..423 | 98 | | Plus |