FMO12057.5prime Sequence
425 bp (425 high quality bases) assembled on 2012-06-25
> FMO12057.5prime
CAGTCGACATGTCTGCACCGCTAGAGAACCTTGAGACCCAGCTAGAGATG
TTCATCGAGAATGTTCGTCAGATCCGCATAATCGTAAGCGATTTTCAGCC
ACAGGGTCAAAATGTACTCAACCAGAAAATTAACAGCTTGGTGACCGGCC
TACAAGAGATCGACAAGCTGCGCTCCCAGGTGCAGGACGTCTATGTGCCA
TTTGAAGTGTTTTTTGACTACATCGACCAAGACAAGAATCCTCAGCTGTA
CACCAAGGATTGCGTGGAGAAGGCACTGGCCAAGAACGAGGAGGTCAAGG
GCAAGATCGAGGGCCTGAAGAAGTTCAAAACGAATCTGCTGCTGGAGCTG
TATAAAACATTTCCCAATGAGATGAACAACTACCGCGCTTATCGCAAGGA
CTCCATGGCAAGCTTTCTAGACCAT
FMO12057.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:14:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| MED10-RB | 597 | CG5057-RB | 119..517 | 9..407 | 1995 | 100 | Plus |
| MED10-RC | 638 | CG5057-RC | 119..517 | 9..407 | 1995 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:14:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 16232380..16232656 | 131..407 | 1385 | 100 | Plus |
| 3L | 28110227 | 3L | 16232202..16232323 | 9..130 | 610 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 03:14:42 has no hits.
FMO12057.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-25 11:41:47 Download gff for
FMO12057.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MED10-RB | 174..576 | 9..412 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:44:30 Download gff for
FMO12057.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MED10-RC | 119..521 | 9..412 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:52:12 Download gff for
FMO12057.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MED10-RC | 119..521 | 9..412 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:52:12 Download gff for
FMO12057.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 16232202..16232323 | 9..130 | 100 | -> | Plus |
| 3L | 16232380..16232660 | 131..412 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:44:30 Download gff for
FMO12057.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 16225302..16225423 | 9..130 | 100 | -> | Plus |
| arm_3L | 16225480..16225760 | 131..412 | 99 | | Plus |
