Clone FMO12064 Report

Search the DGRC for FMO12064

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:120
Well:64
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG13936-RB
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO12064.5prime Sequence

605 bp (605 high quality bases) assembled on 2012-06-25

> FMO12064.5prime
CAGTCGACATGTCCGCCCTGTCCGCGCCCACCACATGTGGCTGCTCGCCT
GTCCACTGGGCCATTGTCATTGTGCTCCTGTCAGTGGCGATTGGACCGGG
AGACGCCATGGCCCGTCCAGCGCGCAACACGCAGTTGTTGTTCAGCGAGC
TCTTGGGGGGCGGAAACGATGATAACAACTACTACGGCGACCAGTTGAAG
TACCAGCAACAGCAACAGCAACAGCAGGAACAGAAGCAGCAGCGGGTGCC
GGCTTTCGCCAGGAAGTGGCCCTCGCTGAGGGATCTGTTGCTCACCGTGG
ACTACGATGACTTCGGGGTTACCCAGGAGAGCGAGGAGCAGGTGGCGCCC
AGTTCCCGCCTGCTGGCTCGACTGCACAGGCTCGGCGATAATGGAGGCGG
CGAGGAGCTGCGGTACAACGTCGTTAACGAACTGACCAATATGCCCAGCA
AGAAGGTGATGCCAGGACATCCCCTCAAGGATCACAACACCAAGAAGAAC
GTTCAGTTTCGTAAACAATATATGTCGCCTTGCCACTTCAAGATCTGCAA
CATGGGACGCAAACGCAACGCTGGCTTCAATTCCTACGCAAGCTTTCTAG
ACCAT

FMO12064.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:14:56
Subject Length Description Subject Range Query Range Score Percent Strand
CNMa-RB 1261 CG13936-RB 604..1182 9..587 2895 100 Plus
CNMa-RC 1900 CG13936-RC 886..1464 9..587 2895 100 Plus
CNMa-RD 1606 CG13936-RD 604..1170 9..587 2705 97.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:14:54
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 1851662..1851972 507..197 1555 100 Minus
3L 28110227 3L 1852052..1852240 197..9 945 100 Minus
3L 28110227 3L 1851351..1851418 587..520 340 100 Minus
Blast to na_te.dros performed on 2014-11-28 03:14:55 has no hits.

FMO12064.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-25 11:41:52 Download gff for FMO12064.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13936-RC 877..1469 1..592 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:44:40 Download gff for FMO12064.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13936-RC 877..1469 1..592 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:52:18 Download gff for FMO12064.5prime
Subject Subject Range Query Range Percent Splice Strand
CNMa-RC 877..1469 1..592 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:52:18 Download gff for FMO12064.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 1851664..1851971 198..505 100 <- Minus
3L 1852052..1852249 1..197 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:44:40 Download gff for FMO12064.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 1851664..1851971 198..505 100 <- Minus
arm_3L 1852052..1852249 1..197 98   Minus