FMO12064.5prime Sequence
605 bp (605 high quality bases) assembled on 2012-06-25
> FMO12064.5prime
CAGTCGACATGTCCGCCCTGTCCGCGCCCACCACATGTGGCTGCTCGCCT
GTCCACTGGGCCATTGTCATTGTGCTCCTGTCAGTGGCGATTGGACCGGG
AGACGCCATGGCCCGTCCAGCGCGCAACACGCAGTTGTTGTTCAGCGAGC
TCTTGGGGGGCGGAAACGATGATAACAACTACTACGGCGACCAGTTGAAG
TACCAGCAACAGCAACAGCAACAGCAGGAACAGAAGCAGCAGCGGGTGCC
GGCTTTCGCCAGGAAGTGGCCCTCGCTGAGGGATCTGTTGCTCACCGTGG
ACTACGATGACTTCGGGGTTACCCAGGAGAGCGAGGAGCAGGTGGCGCCC
AGTTCCCGCCTGCTGGCTCGACTGCACAGGCTCGGCGATAATGGAGGCGG
CGAGGAGCTGCGGTACAACGTCGTTAACGAACTGACCAATATGCCCAGCA
AGAAGGTGATGCCAGGACATCCCCTCAAGGATCACAACACCAAGAAGAAC
GTTCAGTTTCGTAAACAATATATGTCGCCTTGCCACTTCAAGATCTGCAA
CATGGGACGCAAACGCAACGCTGGCTTCAATTCCTACGCAAGCTTTCTAG
ACCAT
FMO12064.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:14:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CNMa-RB | 1261 | CG13936-RB | 604..1182 | 9..587 | 2895 | 100 | Plus |
CNMa-RC | 1900 | CG13936-RC | 886..1464 | 9..587 | 2895 | 100 | Plus |
CNMa-RD | 1606 | CG13936-RD | 604..1170 | 9..587 | 2705 | 97.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:14:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 1851662..1851972 | 507..197 | 1555 | 100 | Minus |
3L | 28110227 | 3L | 1852052..1852240 | 197..9 | 945 | 100 | Minus |
3L | 28110227 | 3L | 1851351..1851418 | 587..520 | 340 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 03:14:55 has no hits.
FMO12064.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-25 11:41:52 Download gff for
FMO12064.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13936-RC | 877..1469 | 1..592 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:44:40 Download gff for
FMO12064.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13936-RC | 877..1469 | 1..592 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:52:18 Download gff for
FMO12064.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CNMa-RC | 877..1469 | 1..592 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:52:18 Download gff for
FMO12064.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 1851664..1851971 | 198..505 | 100 | <- | Minus |
3L | 1852052..1852249 | 1..197 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:44:40 Download gff for
FMO12064.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 1851664..1851971 | 198..505 | 100 | <- | Minus |
arm_3L | 1852052..1852249 | 1..197 | 98 | | Minus |