FMO12069.5prime Sequence
686 bp (686 high quality bases) assembled on 2012-06-25
> FMO12069.5prime
CAGTCGACATGGCGTGCCAAAACCAAAATGCCGCCAACTTCTTGAGCAAT
GGCAAGAAAATTGTGGGGGTGGCTCTTAATTACATGGACGTTGTGCTGGC
CAGGAACGTTCCCGTGCCCAAGGAGCCGCTCGTCTTCCTCAAGCCCACAT
CTTCGTACCTCCAGGAGGGTCAGCCCATTGTGTTACCAAAAGTCTTTACC
AAGGTGGCATATGAAGTGGAACTAGGCGTGGTGATTGGAAAGCCCTGCAA
GAACGTATCCAAGGCAGATGCCATGAGCTATGTGGCAGGATACTGCCTGG
CTTTGGATCTAACTGCCCAGTGCAATTTGGGACCAGCTCGGGCGGCCGGT
CATCCGTGGACCTTGGGCAAGGGATTTGATACTTCTACGCCCGTGTCCCA
GTTTATACCCATCGAAAAAGTGACGGACCCGCACAACTTGCCGCTTTGGC
TCACCGTCAATGGAGACCTTAAGCAAAACGGGTGCACTGCAGACTTAATA
TTCAAGGTGCCCGACATCATTTCCTACGTGTCCAAGTACATGACCCTGGA
GGCCAACGATCTGATCCTTACCGGAACGCCCAATGGTGCCGATGCGTTCA
AGGCAGGCGATGTAATTCAGTGTGGAATGGCCGATCTCGCTAAATTGACC
TTCCAAGTGGAGGCTGAAGCAAGCTTTCTAGACCAT
FMO12069.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:15:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5793-RB | 731 | CG5793-RB | 56..715 | 9..668 | 3285 | 99.8 | Plus |
CG5793-RE | 1601 | CG5793-RE | 231..890 | 9..668 | 3285 | 99.8 | Plus |
CG5793-RD | 788 | CG5793-RD | 113..772 | 9..668 | 3285 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:15:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 21128551..21128890 | 329..668 | 1700 | 100 | Plus |
3R | 32079331 | 3R | 21128346..21128494 | 182..330 | 745 | 100 | Plus |
3R | 32079331 | 3R | 21128121..21128217 | 86..182 | 485 | 100 | Plus |
3R | 32079331 | 3R | 21127978..21128055 | 9..86 | 375 | 98.7 | Plus |
Blast to na_te.dros performed on 2014-11-28 03:15:02 has no hits.
FMO12069.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-25 11:41:55 Download gff for
FMO12069.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5793-RB | 52..718 | 1..672 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:44:44 Download gff for
FMO12069.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5793-RD | 109..775 | 1..672 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:52:22 Download gff for
FMO12069.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5793-RD | 109..775 | 1..672 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:52:22 Download gff for
FMO12069.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 21128121..21128217 | 86..182 | 100 | -> | Plus |
3R | 21128347..21128493 | 183..329 | 100 | -> | Plus |
3R | 21127974..21128054 | 1..85 | 94 | -> | Plus |
3R | 21128552..21128893 | 330..672 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:44:44 Download gff for
FMO12069.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 16953696..16953776 | 1..85 | 94 | -> | Plus |
arm_3R | 16953843..16953939 | 86..182 | 100 | -> | Plus |
arm_3R | 16954069..16954215 | 183..329 | 100 | -> | Plus |
arm_3R | 16954274..16954615 | 330..672 | 99 | | Plus |