FMO12070.5prime Sequence
272 bp (272 high quality bases) assembled on 2012-06-25
> FMO12070.5prime
CAGTCGACATGGCAATCATACGCTGTCTCCATCGAGGCCAACGCTTCGTG
TCCAGCGTATTGCCATTGATTACTTTGATCGGAGATGTACGGGCCAAGTT
TAGGACGCTGTACATTGGTGCCACCATCATCCAATGCAACAAGTTCATAG
TCAAGCACCAAAAACAGTTCCTGGACCGCACCATGGGTCAGATAACCTCC
GCCAAGGAGCGCCAGGATCTCTTCAAGCGCGTAATGGAGTTCGACATGGA
CAGAGCAAGCTTTCTAGACCAT
FMO12070.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:14:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14057-RB | 521 | CG14057-RB | 194..439 | 9..254 | 1230 | 100 | Plus |
| CG14057-RA | 530 | CG14057-RA | 203..448 | 9..254 | 1230 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:14:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 17044483..17044660 | 254..77 | 890 | 100 | Minus |
| 3L | 28110227 | 3L | 17044713..17044781 | 77..9 | 345 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 03:14:45 has no hits.
FMO12070.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-25 11:41:47 Download gff for
FMO12070.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14057-RA | 197..453 | 1..260 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:44:32 Download gff for
FMO12070.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14057-RA | 196..452 | 1..260 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:52:14 Download gff for
FMO12070.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14057-RA | 196..452 | 1..260 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:52:14 Download gff for
FMO12070.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 17044479..17044659 | 78..260 | 98 | <- | Minus |
| 3L | 17044713..17044788 | 1..77 | 94 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:44:32 Download gff for
FMO12070.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 17037579..17037759 | 78..260 | 98 | <- | Minus |
| arm_3L | 17037813..17037888 | 1..77 | 94 | | Minus |
