FMO12071.5prime Sequence
836 bp (836 high quality bases) assembled on 2012-06-25
> FMO12071.5prime
CAGTCGACATGACCGAGGTGAAGATACCCAATCACATAATGCGCCTGAAG
AGCGCCACTCTGGGCTGCCGTTACGCCCTCGACGGGGAGTCCTTGTACTC
GGTGAAGTGGTATAAGGACGGGCACGAGATCTACCGCTATGTGCCACGCG
ATAAGCCCCCCGGACAGTCCTTCCCCCTGCCCGGAGTCAACATCGATCTG
CGTAACTCCTCGGACACCCAGATTCTCCTGCGCCGCGTTACCCTCCAGAG
TTCCGGACTTTATCGGTGCGAGGTGTCCGGCGAGGCGCCCGCATTCAACA
CCGTATCCGAGTCGGAGACCATGACCGTTGTGGTGACCCCCAACCACGGA
CCGAAAATAACAGGTGGCCAGCCGCGCTACCAAATTGGAGACATCGTTCG
GGTTAACTGCACCTCATCGCCGTCCAAGCCCGTCTGTCACCTCAGTTGGC
TAATAAATGGGGAACCGGTGCAAAAGACACACCTTCGGCAATACGACAAG
GTGGTGGTGAATCGAGATGGGTTGGAGATGGCTCGCTTGGGGCTGGAGTT
CCGGGTGAGGTCCTTCCACTTTAAGCACGGCGACATGAAGTTAAAGTGCG
TGGCCAAGATCAGCTCACTGTATCTGCAAAGCAACGAGGAGAGTGTGGAA
AGCGATCGCCAGCATCGGGCCCCGGCATTGGAATCTCGGGAGACGGTAGC
AGCCAAGTCCAGCACGATTGCTGCCGCCTGTTCAAAACTGCCATCAAGCC
TGATTGTCTCACTGCCTCCTGTTCTCCTGCTGCTGCTGTTTCAAAATTGG
AACTGGCCACGAAATAGTGCAAGCTTTCTAGACCAT
FMO12071.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:21:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
beat-IIIa-RE | 4457 | CG12621-RE | 956..1765 | 9..818 | 4050 | 100 | Plus |
beat-IIIa-RD | 1457 | CG12621-RD | 557..1366 | 9..818 | 4050 | 100 | Plus |
CG34106-RB | 4457 | CG34106-RB | 956..1765 | 9..818 | 4050 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:21:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 17169813..17170076 | 333..596 | 1320 | 100 | Plus |
2L | 23513712 | 2L | 17158562..17158750 | 9..197 | 945 | 100 | Plus |
2L | 23513712 | 2L | 17161861..17161996 | 198..333 | 680 | 100 | Plus |
2L | 23513712 | 2L | 17170135..17170260 | 595..720 | 630 | 100 | Plus |
2L | 23513712 | 2L | 17170328..17170426 | 720..818 | 495 | 100 | Plus |
2L | 23513712 | 2L | 16990240..16990368 | 333..461 | 210 | 77.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 03:21:37 has no hits.
FMO12071.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-25 16:45:51 Download gff for
FMO12071.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
beat-IIIa-RD | 212..1039 | 1..828 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:48:44 Download gff for
FMO12071.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34106-RB | 948..1775 | 1..828 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:55:37 Download gff for
FMO12071.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34106-RB | 948..1775 | 1..828 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:55:37 Download gff for
FMO12071.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 17158554..17158750 | 1..197 | 97 | -> | Plus |
2L | 17161861..17161996 | 198..333 | 100 | -> | Plus |
2L | 17169814..17170076 | 334..596 | 100 | -> | Plus |
2L | 17170137..17170260 | 597..720 | 100 | -> | Plus |
2L | 17170329..17170424 | 721..816 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:48:44 Download gff for
FMO12071.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 17158554..17158750 | 1..197 | 97 | -> | Plus |
arm_2L | 17161861..17161996 | 198..333 | 100 | -> | Plus |
arm_2L | 17169814..17170076 | 334..596 | 100 | -> | Plus |
arm_2L | 17170137..17170260 | 597..720 | 100 | -> | Plus |
arm_2L | 17170329..17170424 | 721..816 | 100 | -> | Plus |