FMO12072.5prime Sequence
491 bp (491 high quality bases) assembled on 2012-06-25
> FMO12072.5prime
CAGTCGACATGGATATGGATTTGAATAACGACTTGGAGAAACGCATTTCG
GATGCCTTTTGTGTGTTCGATCATCATGGCGACAAGTTCATCGACGTTAG
AGAAGTGGGCACTGTGCTGAGACTCCTGGGCTGTGTTCCCACCGAGGAGG
AGGTGAACGAAGTAATTTCGGCTACAGAATCGGAGGAGACCAGTGGCGAA
GTGCATTTGACTAAATTTTTGCCACACGTCTCGCAACTGCTCATGGAAAG
AAAAATGGAGCCTGCTCCGCCAGAGAAAATTCTCCAGGCCTTTAAGATCT
TGGATCCGGAGAACAAGGGCTATCTCACCAAGGAGAGCTTTGGCAAACTG
ATGATGGAGGAGGGCGAGCCTTTCACCCAAGAGGAAATGGACGAAATGTG
GCCAGTGGCCATAGACCCAATTAGCGGACACATACCCTATGAGTTCTACC
TGAATCAGCTCATGGTCTATCTGGCAAGCTTTCTAGACCAT
FMO12072.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:14:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11041-RB | 537 | CG11041-RB | 28..494 | 7..473 | 2335 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:14:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 20146214..20146445 | 22..253 | 1160 | 100 | Plus |
2R | 25286936 | 2R | 20146501..20146713 | 254..466 | 1065 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 03:14:49 has no hits.
FMO12072.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-25 11:41:49 Download gff for
FMO12072.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11041-RB | 7..483 | 1..478 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:44:35 Download gff for
FMO12072.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11041-RB | 22..498 | 1..478 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:52:15 Download gff for
FMO12072.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11041-RB | 22..498 | 1..478 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:52:15 Download gff for
FMO12072.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 20146214..20146445 | 22..253 | 100 | -> | Plus |
2R | 20146501..20146716 | 254..470 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:44:35 Download gff for
FMO12072.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 16033719..16033950 | 22..253 | 100 | -> | Plus |
arm_2R | 16034006..16034221 | 254..470 | 99 | | Plus |