FMO12075.5prime Sequence
479 bp (479 high quality bases) assembled on 2012-06-25
> FMO12075.5prime
CAGTCGACATGATGGTTAGCAAATTGTGGAACAGCTGCTTCCCGGAGTTC
ACCCCGGACCATGTGCATCGACACAACTTTTACCTATGCCAGTGGCAACG
GAACACGCAGGTGCGCATCGTTTACCTGTTCTACCGATGGATAACGGCCA
TCACCTGCCTGGCGGCACTGGTCTGCTCCTTGCTGGACATTGGGCGCACG
GACGAGCACTTTGAGCACCACTATGCCAAGTGGTGGATCTACCTGACCCA
CTGGGGACTGCTCTTCTGCACAGTCCAGGCCTGGCTGGCCGCCTGGATAG
TGACCCAGGGCATGATGGTGGAGCGCGAGGACTTCGAGATTGTGCGGCAG
GCGAAGAAGAGCCGCCTGCACCACTTGTACTGGGTGCTCTACACCTGTGC
CACTGTCTATGCGTTCATCGTCACCATGTGCTATTGGCTACTGGTCCACA
ATCCCGGTAAGGCAAGCTTTCTAGACCAT
FMO12075.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:15:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43778-RC | 2595 | CG43778-RC | 2027..2479 | 9..461 | 2265 | 100 | Plus |
CG43778-RA | 6433 | CG43778-RA | 2027..2474 | 9..456 | 2240 | 100 | Plus |
CG43778-RD | 6433 | CG43778-RD | 2027..2474 | 9..456 | 2240 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:15:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 13307930..13308300 | 461..91 | 1855 | 100 | Minus |
2L | 23513712 | 2L | 13308410..13308493 | 92..9 | 420 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 03:15:16 has no hits.
FMO12075.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-25 11:41:59 Download gff for
FMO12075.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16970-RB | 2000..2462 | 1..465 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:44:54 Download gff for
FMO12075.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43778-RC | 2021..2483 | 1..465 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:52:28 Download gff for
FMO12075.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43778-RC | 2021..2483 | 1..465 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:52:28 Download gff for
FMO12075.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 13307926..13308298 | 93..465 | 99 | <- | Minus |
2L | 13308410..13308499 | 1..92 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:44:54 Download gff for
FMO12075.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 13307926..13308298 | 93..465 | 99 | <- | Minus |
arm_2L | 13308410..13308499 | 1..92 | 96 | | Minus |