FMO12077.5prime Sequence
1131 bp (1033 high quality bases) assembled on 2012-06-25
> FMO12077.5prime
CAGTCGACATGGTCAGTGTGGCCGTCGGCACAGTTTCAACGGATATCCTG
AATGGGCGCACATCATTCTTGTCCCTTAGTCAGTCTCACGGGAGTGAAGT
GGATTTGCCTTCGTTCTACGAAAGCTTTAATCCAACTTTTCTTCCCAAGC
TGCCTATCAGAAGATTTCCCCATATGCTTGTGGGGGCATCAAATGAGCCT
GAGATTTCGAAAAACCAGCCAGCAATTCCACCATCTAGGCCAATTGAGCC
AATATCTGAGGTGCCGTTTGTGGAACCGGCCTTTGAGAAAAAATACTCTA
GGACCCGTGGATTTAGCAAGGAATTGTCCACACACAGGGATAATGAGAAT
GAATATATCGAGAGCACAGATGAGGTGTCTCAGATGTTGAGCTTTACTAG
CTATACGGATGAATATGATAGGGCAGAACCACTCATTACCAAAACGCAAA
AGTTTTATAAAAAGAGATCCCCCTTGATTCCCAAATACGATTCCGAGGAT
TCATATGTGGTCCCTAAGGAAACCGATCAACAGGAATCGGGTCTCTCGTT
CAATGTAACTACAGTACAGTTGGCCGATACCGCATCGCCGGAATCTTTCA
GCGAATACGACGGAAATCGAACGCGCAAGCAATCGTTCGACATGGAAAGT
AAAAATTCGAAGGAGTCCTTTGACTTTAGCCGTGGTGGAAGACGACTTGG
CTCCGGTATGGTTTTTATCTATATGGTGATACCACCGGACGGCGGATTCG
GTTGGGTAATCATGGTGCTGTCCTTCCTCGCCCAGCTGATAATCGATGGT
TTAATTTTTACCATTGGGGTCTTATTGCCATCCATTGCCCAGGATCTGGA
TGTCTCCATATCGTCGGTATCGTTTGTGGCCAGTGTCCAGATTGGTTTGC
TACTTCACTAGCGGAGCGTTTTCTGCTGTCTGATAAATCGTTTTGGTTTC
CGAAAGGTAGCCATCGCTGGGGTCCTGTGTTCGCAGTTTCAATACTGCGT
TCAGTTGGAGCGTCAGCTTGACCATGCTGATCTTCCTTTACAGCGTCTTG
GTGGAATTAAGGTTGAAACATGAATCTGGGCAGTTCGCAACTGATTGTTG
CTACTACTTGAACGTACGGTTCGATGCCAAT
FMO12077.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:22:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12866-RC | 2809 | CG12866-RC | 197..1324 | 9..1131 | 5200 | 98.1 | Plus |
CG12866-RB | 2806 | CG12866-RB | 194..1321 | 9..1131 | 5200 | 98.1 | Plus |
CG12866-RE | 2810 | CG12866-RE | 194..1325 | 9..1131 | 5150 | 97.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:22:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 14668644..14669101 | 9..466 | 2290 | 100 | Plus |
2R | 25286936 | 2R | 14669587..14669919 | 717..1047 | 1440 | 98.2 | Plus |
2R | 25286936 | 2R | 14669268..14669518 | 466..716 | 1255 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 03:22:07 has no hits.
FMO12077.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-25 16:45:56 Download gff for
FMO12077.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12866-RC | 192..1312 | 1..1120 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:48:58 Download gff for
FMO12077.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12866-RB | 189..1309 | 1..1120 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:55:51 Download gff for
FMO12077.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12866-RB | 189..1309 | 1..1120 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:55:51 Download gff for
FMO12077.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 14669268..14669518 | 466..716 | 100 | -> | Plus |
2R | 14669587..14669923 | 717..1050 | 97 | -> | Plus |
2R | 14668639..14669100 | 1..465 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:48:58 Download gff for
FMO12077.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 10556144..10556605 | 1..465 | 99 | -> | Plus |
arm_2R | 10556773..10557023 | 466..716 | 100 | -> | Plus |
arm_2R | 10557092..10557428 | 717..1050 | 97 | -> | Plus |