Clone FMO12078 Report

Search the DGRC for FMO12078

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:120
Well:78
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG7991-RC
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO12078.5prime Sequence

1208 bp (1078 high quality bases) assembled on 2012-06-25

> FMO12078.5prime
CAGTCGACATGGGTCAAAACCTGAGCCTGCGACGGCCGCGCATCTCATTG
ACCTGGGTGCTCCGAGAGCAGCAGCAGACGCAGCAGGCTCCTCCGTCGCA
AACACCCCCATCCCCGCAGAAGGAGGCAGCGAAGGAATCGGACAGCCAGG
TGCTGGATCGCAAGGAGAACGAAGTCTTCCCGCCCAGAACAGAGCCCGTG
CCCACCCAGCTGGATGTCACCAAGAAGCGGTACCGTGTTAAGCAGCTACC
AAGTGGTGGTGAGCCGCTCAATGGCTATGCCACCACGCCCACCGCCCACC
AGGCTCCTCCCAACGGTCACCTGGCCAACCAGAAGTTCTTCAGCAACCAA
AACCTGCTGGACGTGTCACGGAGCGGTCCCAGCAGTGCTCCAGTGGCCGC
CGCCTCCACCAAAGAGCTGCTCTTCGTGTGCACACCCCAGCGGGCGCCCA
GGACCGATAGTCATAGCGAAGCCCTGCTTCTGGCCAGAAAGCGAAACGAG
ATCCGTAAGAAGCTGGCCTCCCGCCTGCAGCAGGCAAGATCCAGTGCCTC
GCAGGCGGGTGAGGCCAGGGGATCGGTCACGGGAGCGGAGTCTGTAAAGT
GCACCTCCTACTCGGAGCCCAGTTTGGTGGCTGCCTCGGAGGGCGGCGGA
GTGGGGGGCTCGGGCGGAGGAGCAGCTGCCCCCCAGCAGCAGCGGAGACA
TAGGCATCGCAAGCGTCGGGATCGCAATCGTGTGCAGAGATTTGGCTATG
AGATCCACAACGTGGACGAGTTTCTCTCCCGCTGCTCTCTGGCCACTCCC
GGCAATATTCCCGTGGTTCTTTCCACGGCCAGCACCCTATACCAAACGAG
ACCAGGTGGCTACCAACTGGAGATCCCTCTGCCCCTGGGCATGGTGGTGA
ATGCGGTTTTCAAGAACCAGAACTGGCTGTATGTGCAAACCGCCCCTGGC
GGAAGAAGGGCTATGTGGGCTAATGCCTGCTGCCTGCCCCTTGGGATTCC
TGCCCCAGCAAGGCAAGAAGCGGGCCTCCAAGGAACACCCCCCTGCCTGG
GAGTCCAAATGGCGGAAAGTCTTTCCCCCCGCCCCATGGTGGCCACCATG
ACCGAACCCCCGGAAAAAAGGAAAATCCCGCCCTGGCCTGATGGCCCACC
CGAATCCGAAGTGTCCGCCACCTCCCCCGGCGCCCTCAAGCCCCTGGAAA
AAATGTCC

FMO12078.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:22:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG7991-RC 4073 CG7991-RC 1600..2639 9..1058 4955 98.8 Plus
CG7991-RB 3727 CG7991-RB 1254..2293 9..1058 4955 98.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:22:09
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 1713068..1714065 9..1010 4765 99.3 Plus
Blast to na_te.dros performed on 2014-11-28 03:22:10 has no hits.

FMO12078.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-25 16:45:56 Download gff for FMO12078.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7991-RC 1591..2656 1..1079 97   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:49:01 Download gff for FMO12078.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7991-RB 1245..2310 1..1079 97   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:55:52 Download gff for FMO12078.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7991-RB 1245..2310 1..1079 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:55:52 Download gff for FMO12078.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 1713059..1714124 1..1079 97   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:49:01 Download gff for FMO12078.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 1713059..1714124 1..1079 97   Plus