FMO12081.5prime Sequence
1032 bp (419 high quality bases) assembled on 2012-06-25
> FMO12081.5prime
CAATCCACATGATATTCATCAATGCCTCTGACACTGGCCTTACCCTCACA
CCTGAAATGCTGTTGTCCACCTCGGAATCATCGACCCACATTGCCTCCGA
GGTCCCCGGACGACTGCAGGTCGACGTGCGTACCGGCCTCAAATGGACAG
AGGCCAAGTATCGTGCCAAGATCATCGGGCATAACGAGCTGCTGCTCGTG
GCGGAGGATCCGACATGGAAAAAGTACATTGAGCATTTTAAGAACCCGCT
AATTCTGCTGCTTCTTGGTTCTGCTCTGGTGTCCGTAATCATGAATCAGT
TTGACGACGCCGTGAGCATAACCATTGCCATCCTAATTGTGGTCACGGTG
GCCTTTATCCAGGATTACCGCTCCGATAAGAGTCTGGATGAGCTTAAAAA
GCTGGTGCCCCCTGAATGCCACTGCCTGCGGGAAGGTCGTCTAGACACAT
TCCTGGCACGCGAACTGGTTCCCGGGGACATACTGCACCTCAACGAGGGC
GACCGGGTGCCGGCCGACGTGCGTCTTTTCGAAGCTGTGGACCTATCTAT
CGACAAGAGCAGTTTTACCGGCGAAACAGAGCCGGCGCGCAAAATTACTG
ATGTTTTGCTTAACAATACGAACGTAAAGGACCACAACACCCTGAAGAAC
ATTGCCTTCATGGGCACTCTGGTGCGATGTGGTACGGGAAGGGCATAGTT
GTCAACACTGGGGAGCGTCCTGAGTTCAGTGAGGTCTTCAAATGATGCAT
GCAGAGGAGGCTCCGAATACGCCACTGCAAAATCGATGGACATTCTAGGC
GCTCAATTGAGCTTCTACTCCTTCCTGATTATCGGTGTCATCATGCTGCT
GGGCTGGCTACAAGGTAAGCCGCTTTCGGAAATGTTCATATCAGCGTTTC
CCTGGACGTTGCGGTCATCACCAGAGTGACTTACATATTCGTGGCTAACT
GTGACTCTAACGCTTGCCGTATTGCGAATGACTAAACGAATTTCATTCGT
TAACAAGTCTGCTACTGCTGAAACTTTGGTCT
FMO12081.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:22:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
SPoCk-RF | 4059 | CG50-RF | 558..1578 | 9..1029 | 4220 | 94.7 | Plus |
SPoCk-RE | 4245 | CG32451-RE | 744..1764 | 9..1029 | 4220 | 94.7 | Plus |
SPoCk-RA | 3659 | CG32451-RA | 181..1178 | 32..1029 | 4120 | 94.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:22:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 22777114..22778107 | 36..1029 | 3905 | 94.4 | Plus |
Blast to na_te.dros performed on 2014-11-28 03:22:17 has no hits.
FMO12081.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-25 16:45:58 Download gff for
FMO12081.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
SPoCk-RE | 736..1764 | 1..1029 | 94 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:49:06 Download gff for
FMO12081.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
SPoCk-RE | 736..1764 | 1..1029 | 94 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:55:56 Download gff for
FMO12081.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
SPoCk-RE | 736..1764 | 1..1029 | 94 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:55:56 Download gff for
FMO12081.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 22777108..22778107 | 32..1029 | 94 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:49:06 Download gff for
FMO12081.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 22770208..22771207 | 32..1029 | 94 | | Plus |