FMO12088.5prime Sequence
353 bp (353 high quality bases) assembled on 2012-06-25
> FMO12088.5prime
CAGTCGACATGGCCGAGCTACTTTTTCCACAACTGGAGCGTCCTTTGCCC
TCGCTGCCATCGCTGCACTACACCCTGTTTGCCTACAGGGAGGAGTTGCG
ACGCCGCGATGCCCCGTTCATGAAGATGTCCACCATCAAGCTGCATCTCA
CGGACAACCTCATCCTGCAGACGATCAAGAACATCCGGCAGTATGACACC
ATCGAGATTATGAATCTCAACCAGGAGATAAACTTCAAGCGGCGGCTGAC
CAAACAAATGAGGAAGGTGCGCAAACTGGAGAAGCTCGGCTTGCACATCG
ATCCCCGGAAACTCAACGAGGACGGCAAATGGCACGCAAGCTTTCTAGAC
CAT
FMO12088.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:15:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| halo-RB | 616 | CG7428-RB | 88..414 | 9..335 | 1635 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:15:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 1517735..1518061 | 335..9 | 1635 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 03:15:25 has no hits.
FMO12088.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-25 11:42:07 Download gff for
FMO12088.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| halo-RA | 115..455 | 1..340 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:45:00 Download gff for
FMO12088.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| halo-RB | 79..419 | 1..340 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:52:34 Download gff for
FMO12088.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| halo-RB | 79..419 | 1..340 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:52:34 Download gff for
FMO12088.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 1517730..1518069 | 1..340 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:45:00 Download gff for
FMO12088.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 1517730..1518069 | 1..340 | 98 | | Minus |
