FMO12095.5prime Sequence
1097 bp (945 high quality bases) assembled on 2012-06-25
> FMO12095.5prime
CAGTCGACATGTCGCACGGTGGAGCCGGTGGCGGTCTGGGAGCTCAAACT
GTTGGAGCCGGCCAACTTGGAGGCGGTGCAGCGGCAGCTGGCGGTGGAGA
ATACCGCGAACTCCACTGGACGGTCTCAAGCGTAATGGACTCGTCTCGGG
TCTCTACCTGCCTCATATCGATGCTGCTGATAGTCTACGGCAGCTTTCGC
TCCTTAAACATCGAGCAGGAGGCCCGCGAGCGGGAGCAGAAGAAGCGAAA
TGAATCGATGACCAATCTTCTTACCGGCGAGCCCGTCGAGAAGGAACCAA
CGGATAAATTCGCCACTCTGGACACGATGCATGCCCTCTGTTTGCCCCTC
GGAGCTTCCATCTCACTGCTCATCATGTTCTTCTTCTTCGACTCGATGCA
GCTGCTCTTCGCCGTCTGCACAACGATTATAGCCACCGTGGCGCTGGCCT
TTCTGCTGCTGCCCATGTGCCAGTACATCATCAGGCCATGCACAGATGGA
AAGCGATTCTCCTTCGGATTCTGCGGTCGCTTCACAGCCGCGGAGCTCTT
CAGCTTTACGCTTTCGGTATCGATTGTGTGCATATGGGTGCTCACTGGCC
ACTGGCTGCTAATGGATGCAATGGGCATGGGCCTGTGTGTGGCATTCATA
GCGTTTGTGCGTCTGCCCAGCTTTGAAGGTGTCTACGCTGCTGTTGACCG
GCCTGCTCATCTACGACGTCTTCTGGGTATTCCTCTCCTCGTACATCTTC
AGCACCAACGTGATGGTCAAGGTGGCGACGCGACCCGCCGATAATCCCGT
GGGCATCGTGACCAGAAAGTTGCATCTGGGTGGCATTGTGCGGGACACAC
CAAAGCTGAATCTGCCCGGAAAGCTTGTTTTTCCCAAGCCTGCAAATACC
GGTCACTTCTCTATGCTGGGCCTGGGTGAAGTGGAGGATGCCGGCCTGTT
GCTGTGCTTCGTCTGCAGTATGATGCGTACAAGAAGGCGCAGGGCGTCCA
TCGGATTCCAACATCGTCACTACCAGAGGAGTGGCTCCCGGATTGACATA
CTTCATTGTTCTAATGGGATATATTTCTGGGACTGACTACAGCGTAC
FMO12095.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:22:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
SppL-RF | 2561 | CG17370-RF | 602..1657 | 8..1061 | 4870 | 98 | Plus |
SppL-RC | 2164 | CG17370-RC | 205..1260 | 8..1061 | 4870 | 98 | Plus |
SppL-RB | 2101 | CG17370-RB | 649..1704 | 8..1061 | 4870 | 98 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:22:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 25886565..25886945 | 618..998 | 1565 | 96.3 | Plus |
3R | 32079331 | 3R | 25885537..25885829 | 8..300 | 1465 | 100 | Plus |
3R | 32079331 | 3R | 25886307..25886498 | 427..618 | 960 | 100 | Plus |
3R | 32079331 | 3R | 25885895..25886020 | 301..426 | 615 | 99.2 | Plus |
Blast to na_te.dros performed on 2014-11-28 03:22:24 has no hits.
FMO12095.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-25 16:45:59 Download gff for
FMO12095.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17370-RC | 196..1219 | 1..1024 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:49:10 Download gff for
FMO12095.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
SppL-RA | 441..1464 | 1..1024 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:55:59 Download gff for
FMO12095.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
SppL-RB | 642..1665 | 1..1024 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:55:59 Download gff for
FMO12095.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 25885530..25885829 | 1..300 | 99 | -> | Plus |
3R | 25885895..25886020 | 301..426 | 99 | -> | Plus |
3R | 25886307..25886498 | 427..618 | 100 | -> | Plus |
3R | 25886566..25886971 | 619..1024 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:49:10 Download gff for
FMO12095.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 21711617..21711742 | 301..426 | 99 | -> | Plus |
arm_3R | 21712029..21712220 | 427..618 | 100 | -> | Plus |
arm_3R | 21711252..21711551 | 1..300 | 99 | -> | Plus |
arm_3R | 21712288..21712693 | 619..1024 | 96 | | Plus |