Clone FMO12106 Report

Search the DGRC for FMO12106

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:121
Well:6
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG31267-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO12106.5prime Sequence

851 bp (851 high quality bases) assembled on 2012-07-23

> FMO12106.5prime
CAGTCGACATGTCTTACCAAACCGGAGCGGTTTCTACACTCGTCCTCGTC
CTGTTGGCGTTATCCTTTTCGGAGGCAAGTTTACGCCGTCGGGCCTTCAC
TTCAGAAAAATCCGAAACCGCGAATAAATTTAGCTCCCGAATCGTCGGAG
GAGAAGAATCCGATGTCCTGGCGGCACCCTATCTAGTCTCGCTCCAAAAC
GCCTATGGTAACCACTTTTGTGCCGGCTCCATTATCCACGATCAGTGGGT
CATCACCGCGGCTAGTTGCCTGGCTGGATTGCGAAAGAACAACGTGCAGG
TGGTGACCACCACCTATAATCACTGGGGATCGGAGGGCTGGATATACTCC
GTGGAGGATATCGTCATGCACTGCAACTTCGACAGCCCCATGTACCATAA
TGACATTGCCCTGATCAAGACGCATGCACTATTCGATTACGATGATGTCA
CTCAGAATATCACAATCGCTCCGTTGGAGGATTTGACCGATGGTGAAACG
CTAACCATGTACGGATACGGCAGCACGGAGATCGGAGGAGATTTCTCATG
GCAGCTGCAGCAGTTGGATGTAACCTATGTCGCGCCGGAAAAGTGCAATG
CCACGTACGGCGGTACTCCAGATCTGGATGTGGGTCACCTTTGTGCCGTG
GGAAAGGTGGGAGCCGGAGCATGTCATGGAGATACCGGAGGACCCATCGT
TGACAGTCGTGGTCGCTTGGTGGGCGTTGGTAACTGGGGCGTTCCGTGCG
GCTATGGATTTCCCGATGTTTTTGCCCGCATTAGCTTTTACTACAGCTGG
ATTATATCAACGATTAACGGATGTGCTATTTCCGCAAGCTTTCTAGACCA
T

FMO12106.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 17:55:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG31267-RA 921 CG31267-RA 24..848 9..833 4125 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 17:55:37
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 17134585..17135210 208..833 3130 100 Plus
3R 32079331 3R 17134220..17134419 9..208 1000 100 Plus
Blast to na_te.dros performed on 2014-11-28 17:55:38 has no hits.

FMO12106.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-07-23 10:31:44 Download gff for FMO12106.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31267-RA 16..852 1..838 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:36:59 Download gff for FMO12106.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31267-RA 16..852 1..838 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:43:54 Download gff for FMO12106.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31267-RA 16..852 1..838 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:43:54 Download gff for FMO12106.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 17134212..17134419 1..208 98 -> Plus
3R 17134586..17135214 209..838 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:36:59 Download gff for FMO12106.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 12959934..12960141 1..208 98 -> Plus
arm_3R 12960308..12960936 209..838 99   Plus