FMO12107.5prime Sequence
584 bp (584 high quality bases) assembled on 2012-07-23
> FMO12107.5prime
CAGTCGACATGCTGAAGACATTGGTTCAACTTTTCCTTGTTGTCGCCGGT
TTTGCACCAGGATTCGGCTACGACAAGTACACCACACACATACAAAATGG
AAACCCGTACAACTTGACCGTTGACATGACTCCCTTCATTAAGATCAACG
AAAGCTACTATGTTTTTGGACAGACTAAGGTCAATTGGTATGTCGCCTAC
GAGAACTGCCGCAGGCTTCAATCCGAACTGGTGACCTTCGAAACAGCCGA
AGAGTTTGACGCCATTGCCGCGTTCTTGAATGCCCGAGGAGATCGCTCCG
AGCACTGGACCTCCGGCAATGATTTGGGCAAAACCGGCACCCACTACTGG
TTCTCTAATGCACAACTCGTGACCATTAAGCGTTGGGCGCCCAAACAACC
AGACAATGCTGGCGGTAGGGAGCATTGCATACACTTGGGCTACATCTACG
GCTATTCAACGGAGTTCCAACTGAATGATCGACCCTGCCACAACCACGCG
AGTAGCTTGTTTAAGTACATTTGTGAGGCTCCAAAGCAGGAAACTGTATC
TATTGTTGTTTGGAAGGCAAGCTTTCTAGACCAT
FMO12107.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 17:55:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| lectin-37Da-RB | 638 | CG33532-RB | 2..559 | 9..566 | 2790 | 100 | Plus |
| lectin-37Da-RA | 651 | CG33532-RA | 2..559 | 9..566 | 2790 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 17:55:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 19418470..19418937 | 99..566 | 2340 | 100 | Plus |
| 2L | 23513712 | 2L | 19418318..19418409 | 9..100 | 460 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 17:55:42 has no hits.
FMO12107.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-07-23 10:31:45 Download gff for
FMO12107.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| lectin-37Da-RB | 1..559 | 9..566 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:37:01 Download gff for
FMO12107.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| lectin-37Da-RA | 1..559 | 9..566 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:43:56 Download gff for
FMO12107.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| lectin-37Da-RA | 1..559 | 9..566 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:43:56 Download gff for
FMO12107.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 19418311..19418408 | 2..99 | 95 | -> | Plus |
| 2L | 19418471..19418937 | 100..566 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:37:01 Download gff for
FMO12107.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 19418311..19418408 | 2..99 | 95 | -> | Plus |
| arm_2L | 19418471..19418937 | 100..566 | 100 | | Plus |
